RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 OR6C75A6NL08 312 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 I6L893 689 aaPredicted RBP11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 MAP2K7O14733 419 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 RRP9O43818 475 aaKnown RBP11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 DESP17661 470 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 OTUD4Q01804 1114 aaKnown RBP11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 CUL1Q13616 776 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 PPP1R7Q15435 360 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 NFE2Q16621 373 aaPredicted RBP11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 SPOUT1Q5T280 376 aaKnown RBP11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 BSPRYQ5W0U4 402 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 TMEM199Q8N511 208 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 ACTL9Q8TC94 416 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 RASAL2Q9UJF2 1139 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 STAP1Q9ULZ2 295 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 PCDHB5Q9Y5E4 795 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 MRPL42Q9Y6G3 142 aaKnown RBP11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 MTMR11A4FU01 709 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 C2CD2LO14523 706 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 L1CAMP32004 1257 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 USP46P62068 366 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 ELAVL2Q12926 359 aaKnown RBP11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 KCNT2Q6UVM3 1135 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 B4GALNT4Q76KP1 1039 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 PQLC3Q8N755 202 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 TSEN2Q8NCE0 465 aaKnown RBP11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 NEU2Q9Y3R4 380 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 CDY1Q9Y6F8 540 aa11.39□□□□□ -0.59
PDXDC1-216ENST00000569715 RDXP35241 583 aaKnown RBP11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 VPS41P49754 854 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 DEUP1Q05D60 604 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 BYSLQ13895 437 aaKnown RBP11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 FAM182AQ5T1J6 154 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 ZDHHC24Q6UX98 284 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 HDXQ7Z353 690 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 RNF168Q8IYW5 571 aaPredicted RBP11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 PCDH19Q8TAB3 1148 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 FUBP3Q96I24 572 aaKnown RBP eCLIP11.38□□□□□ -0.593e-8■□□□□ 9.4
PDXDC1-216ENST00000569715 WDR6Q9NNW5 1121 aaKnown RBP11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 EFR3BQ9Y2G0 817 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 OASLQ15646 514 aaKnown RBP11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 DPYSL2Q16555 572 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 ANKRD20A8PQ5CZ79 823 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 MTERF4Q7Z6M4 381 aaKnown RBP11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 SCD5Q86SK9 330 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 ATL2Q8NHH9 583 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 RIN2Q8WYP3 895 aaPredicted RBP11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 IRGQQ8WZA9 623 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 RUNDC3BQ96NL0 473 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 RNF157Q96PX1 679 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 NMUR1Q9HB89 426 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 ZDHHC18Q9NUE0 388 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 FZD10Q9ULW2 581 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 MAP3K6O95382 1288 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 ETS1P14921 441 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 VCPP55072 806 aaKnown RBP11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 BTG3Q14201 252 aaPredicted RBP11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 PDK2Q15119 407 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 EMBQ6PCB8 327 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 ANKS3Q6ZW76 656 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 TAC4Q86UU9 113 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 SLC35B2Q8TB61 432 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 FAM71BQ8TC56 605 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 CAVIN3Q969G5 261 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 TMEM121Q9BTD3 319 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 FAM114A2Q9NRY5 505 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 HOMER3Q9NSC5 361 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 DDIT4Q9NX09 232 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 NUDT5Q9UKK9 219 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 MFHAS1Q9Y4C4 1052 aa11.38□□□□□ -0.59
PDXDC1-216ENST00000569715 TP73O15350 636 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 ZSCAN5DPP0CG00 497 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 GPR17Q13304 367 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 PTK6Q13882 451 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 SCML4Q8N228 414 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 PLD5Q8N7P1 536 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 SEPT5Q99719 369 aaPredicted RBP11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 FAM204AQ9H8W3 233 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 IL23AQ9NPF7 189 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 OSER1Q9NX31 292 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 ASIC3Q9UHC3 531 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 WDR27A2RRH5 827 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 PLTPP55058 493 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 YWHAGP61981 247 aaKnown RBP eCLIP11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 USP41Q3LFD5 358 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 C1orf228Q6PIY5 440 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 VSTM1Q6UX27 236 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 SLC39A11Q8N1S5 342 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 FBXO22Q8NEZ5 403 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 FBXO25Q8TCJ0 367 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 DQX1Q8TE96 717 aaKnown RBP11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 LRRN4Q8WUT4 740 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 BADQ92934 168 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 C8orf48Q96LL4 319 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 NCAPGQ9BPX3 1015 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 HPCAL4Q9UM19 191 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 ZNF148Q9UQR1 794 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 A0A1W2PQH9 124 aa11.37□□□□□ -0.59
PDXDC1-216ENST00000569715 ZBBXA8MT70 800 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms