RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 WASP42768 502 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 PLA2G4AP47712 749 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 PSEN1P49768 467 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 STARD3Q14849 445 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 ACOT1Q86TX2 421 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 CHCHD4Q8N4Q1 142 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 ZNF276Q8N554 614 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 DEFB119Q8N690 84 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 ZMIZ2Q8NF64 920 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 CADM4Q8NFZ8 388 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 ZNF396Q96N95 335 aaPredicted RBP16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 SMOQ99835 787 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 DNAI2Q9GZS0 605 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 FSCN3Q9NQT6 498 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 MTMR6Q9Y217 621 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 APOBEC2Q9Y235 224 aaKnown RBP16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 PCDHA5Q9Y5H7 936 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 CEP192Q8TEP8 1941 aa16.62■□□□□ 0.25
HERPUD1-215ENST00000568676 PKD1L2Q7Z442 2459 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 BAHCC1Q9P281 2608 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 PRRT4C9JH25 899 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 TRIM24O15164 1050 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 STX6O43752 255 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 CUTAO60888 179 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 YEATS4O95619 227 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 C4BPAP04003 597 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 FAM200BP0CF97 657 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 MAP3K7CLP57077 242 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 FAM193AP78312 1265 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 TPGS1Q6ZTW0 290 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 GLRX5Q86SX6 157 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 NAXDQ8IW45 347 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 SLC2A14Q8TDB8 520 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 DNASE2BQ8WZ79 361 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 CDK5RAP1Q96SZ6 601 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 ACOX2Q99424 681 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 DNMT3LQ9UJW3 386 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 FBXO10Q9UK96 956 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 SLC27A6Q9Y2P4 619 aa16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 MYO18AQ92614 2054 aaKnown RBP16.61■□□□□ 0.25
HERPUD1-215ENST00000568676 A0A1B0GTW7 788 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 LRRIQ3A6PVS8 624 aaPredicted RBP16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 SH3BP5O60239 455 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 CAPNS1P04632 268 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 CISD3P0C7P0 127 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 ZNF883P0CG24 379 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 OXTRP30559 389 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 CHKAP35790 457 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 IL27RAQ6UWB1 636 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 SCARA5Q6ZMJ2 495 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 SLC9A9Q8IVB4 645 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 UCMAQ8WVF2 138 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 WBP2Q969T9 261 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 CACNA2D2Q9NY47 1150 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 USP36Q9P275 1121 aaKnown RBP16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 GON4LQ3T8J9 2241 aa16.6■□□□□ 0.25
HERPUD1-215ENST00000568676 IKBKBO14920 756 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 BEST1O76090 585 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 TBX18O95935 607 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 FTH1P19P0C7X4 201 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 CCDC130P13994 396 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 CASP4P49662 377 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 NDST1P52848 882 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 GRIK2Q13002 908 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 ZACNQ401N2 412 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 KIAA1324Q6UXG2 1013 aaKnown RBP16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 Q6ZNB5 142 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 TOGARAM2Q6ZUX3 1019 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 HNRNPABQ99729 332 aaKnown RBP16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 DCLK3Q9C098 648 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 SDCBP2Q9H190 292 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 PCED1AQ9H1Q7 454 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 PRDM16Q9HAZ2 1276 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 SLC39A2Q9NP94 309 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 ITM2CQ9NQX7 267 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 WSB2Q9NYS7 404 aaPredicted RBP16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 CLIC5Q9NZA1 410 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 KIAA1522Q9P206 1035 aaPredicted RBP16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 STON1Q9Y6Q2 735 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 CACNA1EQ15878 2313 aa16.59■□□□□ 0.25
HERPUD1-215ENST00000568676 AKAP13Q12802 2813 aa16.58■□□□□ 0.25
HERPUD1-215ENST00000568676 MEI4A8MW99 385 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 TAF4O00268 1085 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 VNN1O95497 513 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 CER1O95813 267 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 RALAP11233 206 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 RARGP13631 454 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 PDIA4P13667 645 aaKnown RBP16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 HOXB3P14651 431 aaPredicted RBP16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 COG7P83436 770 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 ENPP2Q13822 863 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 EIF4HQ15056 248 aaKnown RBP16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 SHC4Q6S5L8 630 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 CCNI2Q6ZMN8 369 aaPredicted RBP16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 CLEC20AQ6ZU45 233 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 CCDC186Q7Z3E2 898 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 OR2I1PQ8NGU4 316 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 PLEKHO2Q8TD55 490 aa16.58■□□□□ 0.24
HERPUD1-215ENST00000568676 TMC2Q8TDI7 906 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms