RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CNOT1A5YKK6 2376 aaKnown RBP19.59■□□□□ 0.73
LINC01238-205ENST00000567549 MYO18AQ92614 2054 aaKnown RBP19.58■□□□□ 0.73
LINC01238-205ENST00000567549 GFRA2O00451 464 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 CYP26A1O43174 497 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 BEST1O76090 585 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 SMC2O95347 1197 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 TRIM49P0CI25 452 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 TRIM49CP0CI26 452 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 TYRP14679 529 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 DGKGP49619 791 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 KIF11P52732 1056 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 ZNF132P52740 706 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 LYSMD4Q5XG99 296 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 TMEM25Q86YD3 366 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 CHPFQ8IZ52 775 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 PHTF2Q8N3S3 785 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 UCMAQ8WVF2 138 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 PIGKQ92643 395 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.58■□□□□ 0.72
LINC01238-205ENST00000567549 MAPK8IP1Q9UQF2 711 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 ABCA7Q8IZY2 2146 aa19.58■□□□□ 0.72
LINC01238-205ENST00000567549 LNP1A1A4G5 178 aa19.57■□□□□ 0.72
LINC01238-205ENST00000567549 KCNK5O95279 499 aa19.57■□□□□ 0.72
LINC01238-205ENST00000567549 CYBBP04839 570 aa19.57■□□□□ 0.72
LINC01238-205ENST00000567549 ATXN3P54252 364 aaPredicted RBP19.57■□□□□ 0.72
LINC01238-205ENST00000567549 SHC2P98077 582 aa19.57■□□□□ 0.72
LINC01238-205ENST00000567549 PPP3CAQ08209 521 aa19.57■□□□□ 0.72
LINC01238-205ENST00000567549 C1orf220Q5T0J3 134 aa19.57■□□□□ 0.72
LINC01238-205ENST00000567549 GSDMAQ96QA5 445 aa19.57■□□□□ 0.72
LINC01238-205ENST00000567549 SMOC1Q9H4F8 434 aa19.57■□□□□ 0.72
LINC01238-205ENST00000567549 OLA1Q9NTK5 396 aaKnown RBP19.57■□□□□ 0.72
LINC01238-205ENST00000567549 RAB20Q9NX57 234 aa19.57■□□□□ 0.72
LINC01238-205ENST00000567549 ACACBO00763 2458 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 A0A1W2PQH9 124 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 C4orf47A7E2U8 309 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 HHLA1C9JL84 531 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 SLC16A3O15427 465 aaKnown RBP19.56■□□□□ 0.72
LINC01238-205ENST00000567549 PPP1R2P41236 205 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 NOVA1P51513 510 aaKnown RBP19.56■□□□□ 0.72
LINC01238-205ENST00000567549 STIM1Q13586 685 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 STARD3Q14849 445 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 EMC10Q5UCC4 262 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 TCEAL6Q6IPX3 200 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 TPGS1Q6ZTW0 290 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 RSRC2Q7L4I2 434 aaKnown RBP19.56■□□□□ 0.72
LINC01238-205ENST00000567549 TCEAL3Q969E4 200 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 TMEM176AQ96HP8 235 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 SLC32A1Q9H598 525 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 RXFP3Q9NSD7 469 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 HESX1Q9UBX0 185 aa19.56■□□□□ 0.72
LINC01238-205ENST00000567549 ADAM23O75077 832 aa19.55■□□□□ 0.72
LINC01238-205ENST00000567549 PRR29P0C7W0 189 aa19.55■□□□□ 0.72
LINC01238-205ENST00000567549 CEACAM1P13688 526 aa19.55■□□□□ 0.72
LINC01238-205ENST00000567549 CSRP1P21291 193 aaKnown RBP19.55■□□□□ 0.72
LINC01238-205ENST00000567549 BCKDHBP21953 392 aa19.55■□□□□ 0.72
LINC01238-205ENST00000567549 ZNF445P59923 1031 aa19.55■□□□□ 0.72
LINC01238-205ENST00000567549 MCCD1P59942 119 aaPredicted RBP19.55■□□□□ 0.72
LINC01238-205ENST00000567549 FKBP3Q00688 224 aaKnown RBP19.55■□□□□ 0.72
LINC01238-205ENST00000567549 RPL6Q02878 288 aaKnown RBP19.55■□□□□ 0.72
LINC01238-205ENST00000567549 ZCWPW2Q504Y3 356 aa19.55■□□□□ 0.72
LINC01238-205ENST00000567549 TRIM61Q5EBN2 209 aa19.55■□□□□ 0.72
LINC01238-205ENST00000567549 PPP1R26Q5T8A7 1209 aaPredicted RBP19.55■□□□□ 0.72
LINC01238-205ENST00000567549 N4BP2L1Q5TBK1 243 aaPredicted RBP19.55■□□□□ 0.72
LINC01238-205ENST00000567549 TCERG1LQ5VWI1 586 aa19.55■□□□□ 0.72
LINC01238-205ENST00000567549 ELMO3Q96BJ8 720 aa19.55■□□□□ 0.72
LINC01238-205ENST00000567549 TWNKQ96RR1 684 aa19.55■□□□□ 0.72
LINC01238-205ENST00000567549 APOBEC3GQ9HC16 384 aaKnown RBP19.55■□□□□ 0.72
LINC01238-205ENST00000567549 CISHQ9NSE2 258 aa19.55■□□□□ 0.72
LINC01238-205ENST00000567549 USP3Q9Y6I4 520 aa19.55■□□□□ 0.72
LINC01238-205ENST00000567549 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 TBX18O95935 607 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 TBXAS1P24557 533 aaPredicted RBP19.54■□□□□ 0.72
LINC01238-205ENST00000567549 PMLP29590 882 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 RDXP35241 583 aaKnown RBP19.54■□□□□ 0.72
LINC01238-205ENST00000567549 ST3GAL2Q16842 350 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 DUOXA1Q1HG43 343 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 ZNF394Q53GI3 561 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 COBLL1Q53SF7 1204 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 SYCP2LQ5T4T6 812 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 PSAPL1Q6NUJ1 521 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 GPRIN1Q7Z2K8 1008 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 MIB1Q86YT6 1006 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 TMEFF1Q8IYR6 380 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 RLN3Q8WXF3 142 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 SUSD2Q9UGT4 822 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 RASAL2Q9UJF2 1139 aa19.54■□□□□ 0.72
LINC01238-205ENST00000567549 NDUFS2O75306 463 aa19.53■□□□□ 0.72
LINC01238-205ENST00000567549 STC2O76061 302 aa19.53■□□□□ 0.72
LINC01238-205ENST00000567549 HNRNPLP14866 589 aaKnown RBP eCLIP19.53■□□□□ 0.72
LINC01238-205ENST00000567549 BCAT1P54687 386 aa19.53■□□□□ 0.72
LINC01238-205ENST00000567549 LRRC63Q05C16 580 aa19.53■□□□□ 0.72
LINC01238-205ENST00000567549 CETN1Q12798 172 aa19.53■□□□□ 0.72
LINC01238-205ENST00000567549 MAP7D1Q3KQU3 841 aa19.53■□□□□ 0.72
LINC01238-205ENST00000567549 DCAF17Q5H9S7 520 aaPredicted RBP19.53■□□□□ 0.72
LINC01238-205ENST00000567549 ZNF658Q5TYW1 1059 aaPredicted RBP19.53■□□□□ 0.72
LINC01238-205ENST00000567549 ARHGAP17Q68EM7 881 aa19.53■□□□□ 0.72
LINC01238-205ENST00000567549 SLC23A3Q6PIS1 610 aa19.53■□□□□ 0.72
LINC01238-205ENST00000567549 Q6ZNB5 142 aa19.53■□□□□ 0.72
LINC01238-205ENST00000567549 HDDC3Q8N4P3 179 aa19.53■□□□□ 0.72
LINC01238-205ENST00000567549 ANKRD52Q8NB46 1076 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms