RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 CEACAM1P13688 526 aa15.79■□□□□ 0.12
RNF40-209ENST00000566703 TYRP14679 529 aa15.79■□□□□ 0.12
RNF40-209ENST00000566703 ST3GAL2Q16842 350 aa15.79■□□□□ 0.12
RNF40-209ENST00000566703 ZCWPW2Q504Y3 356 aa15.79■□□□□ 0.12
RNF40-209ENST00000566703 KRT39Q6A163 491 aa15.79■□□□□ 0.12
RNF40-209ENST00000566703 Q6ZNB5 142 aa15.79■□□□□ 0.12
RNF40-209ENST00000566703 NUSAP1Q9BXS6 441 aaKnown RBP15.79■□□□□ 0.12
RNF40-209ENST00000566703 MBD1Q9UIS9 605 aaPredicted RBP15.79■□□□□ 0.12
RNF40-209ENST00000566703 FBXO10Q9UK96 956 aa15.79■□□□□ 0.12
RNF40-209ENST00000566703 HCN2Q9UL51 889 aa15.79■□□□□ 0.12
RNF40-209ENST00000566703 ABCA7Q8IZY2 2146 aa15.79■□□□□ 0.12
RNF40-209ENST00000566703 SPTBN2O15020 2390 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 A0A1W2PQF6 199 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 A0A1W2PQH9 124 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 NEDD8-MDP1E9PL57 170 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 CYP26A1O43174 497 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 AP5Z1O43299 807 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 STX10O60499 249 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 ZNF202O95125 648 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 CISD3P0C7P0 127 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 TRIM49P0CI25 452 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 TRIM49CP0CI26 452 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 HOXB2P14652 356 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 GABRG2P18507 467 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 NOVA1P51513 510 aaKnown RBP15.78■□□□□ 0.12
RNF40-209ENST00000566703 COG7P83436 770 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 C10orf120Q5SQS8 335 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 PPP1R26Q5T8A7 1209 aaPredicted RBP15.78■□□□□ 0.12
RNF40-209ENST00000566703 PEAR1Q5VY43 1037 aaPredicted RBP15.78■□□□□ 0.12
RNF40-209ENST00000566703 PSAPL1Q6NUJ1 521 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 SLC23A3Q6PIS1 610 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 TPGS1Q6ZTW0 290 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 SCD5Q86SK9 330 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 TMEFF1Q8IYR6 380 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 HEXIM2Q96MH2 286 aaKnown RBP15.78■□□□□ 0.12
RNF40-209ENST00000566703 DCLK3Q9C098 648 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 CIZ1Q9ULV3 898 aaPredicted RBP15.78■□□□□ 0.12
RNF40-209ENST00000566703 MAPK8IP1Q9UQF2 711 aa15.78■□□□□ 0.12
RNF40-209ENST00000566703 PATE3B3GLJ2 98 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 TRIM24O15164 1050 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 STC2O76061 302 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 CD58P19256 250 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 CHKAP35790 457 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 ZNF132P52740 706 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 E2F5Q15329 346 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 TRIM61Q5EBN2 209 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 LYSMD4Q5XG99 296 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 EGFLAMQ63HQ2 1017 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 RABEPKQ7Z6M1 372 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 CHPFQ8IZ52 775 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 ARHGAP18Q8N392 663 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 FRMD1Q8N878 549 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 FBXL13Q8NEE6 735 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 CEP76Q8TAP6 659 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 GABRG3Q99928 467 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 CD248Q9HCU0 757 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 ZDHHC4Q9NPG8 344 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 TMEM74BQ9NUR3 256 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 RAB20Q9NX57 234 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 NAGPAQ9UK23 515 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 PILRBQ9UKJ0 227 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 SLC27A6Q9Y2P4 619 aa15.77■□□□□ 0.12
RNF40-209ENST00000566703 MYOFQ9NZM1 2061 aa15.77■□□□□ 0.11
RNF40-209ENST00000566703 PRRT4C9JH25 899 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 NPC1O15118 1278 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 CETN3O15182 167 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 KRT37O76014 449 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 PTGER3P43115 390 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 DGKGP49619 791 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 DUOXA1Q1HG43 343 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 SH3PXD2AQ5TCZ1 1133 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 ARHGAP17Q68EM7 881 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 MIB1Q86YT6 1006 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 IPO4Q8TEX9 1081 aaKnown RBP15.76■□□□□ 0.11
RNF40-209ENST00000566703 JAKMIP2Q96AA8 810 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 TMEM176AQ96HP8 235 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 CALCOCO1Q9P1Z2 691 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 SLC6A14Q9UN76 642 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 THADAQ6YHU6 1953 aa15.76■□□□□ 0.11
RNF40-209ENST00000566703 UPK3BL1B0FP48 263 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 UPK3BL2E5RIL1 263 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 MDM4O15151 490 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 KLKB1P03952 638 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 EPB41P11171 864 aaKnown RBP15.75■□□□□ 0.11
RNF40-209ENST00000566703 WASP42768 502 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 RAD23BP54727 409 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 SLC8A3P57103 927 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 RPL6Q02878 288 aaKnown RBP15.75■□□□□ 0.11
RNF40-209ENST00000566703 ZNF33AQ06730 810 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 ZNF394Q53GI3 561 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 RAB41Q5JT25 222 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 TOGARAM2Q6ZUX3 1019 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 ANKRD52Q8NB46 1076 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 SEMA4DQ92854 862 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 ACOX2Q99424 681 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 MMRN2Q9H8L6 949 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 CISHQ9NSE2 258 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 NUDT5Q9UKK9 219 aa15.75■□□□□ 0.11
RNF40-209ENST00000566703 TPRP12270 2363 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms