RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 SLC25A41Q8N5S1 370 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 NDRG1Q92597 394 aaKnown RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 PPWD1Q96BP3 646 aaKnown RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 DDX43Q9NXZ2 648 aaKnown RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 MID2Q9UJV3 735 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 ANGPTL2Q9UKU9 493 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 STRNO43815 780 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 SMIM24O75264 130 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 LMNAP02545 664 aaKnown RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 MGAT1P26572 445 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 SPRP35270 261 aaPredicted RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 GDF10P55107 478 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 MFSD5Q6N075 450 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 SLC4A11Q8NBS3 891 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 HTR3CQ8WXA8 447 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 USP6NLQ92738 828 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 STRA6Q9BX79 667 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 UNKQ9C0B0 810 aaKnown RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 NXF3Q9H4D5 531 aaKnown RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 LRFN2Q9ULH4 789 aa11.98□□□□□ -0.49
CDH1-210ENST00000566612 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.98□□□□□ -0.49
CDH1-210ENST00000566612 POMCP01189 267 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 PCSK1P29120 753 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 MLH1P40692 756 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 SLC12A1Q13621 1099 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 FNBP1LQ5T0N5 605 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 IL31Q6EBC2 164 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 GTF3C2Q8WUA4 911 aaPredicted RBP11.97□□□□□ -0.49
CDH1-210ENST00000566612 TXNRD2Q9NNW7 524 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 CLDN5O00501 218 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 KCNA4P22459 653 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 ELF1P32519 619 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 THPOP40225 353 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 CASP2P42575 452 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 GLRBP48167 497 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 ACAP1Q15027 740 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 SLC1A5Q15758 541 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 MYLK4Q86YV6 388 aaPredicted RBP11.97□□□□□ -0.49
CDH1-210ENST00000566612 ATPAF2Q8N5M1 289 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 CPT1BQ92523 772 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 TWNKQ96RR1 684 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 TBCBQ99426 244 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 LGMNQ99538 433 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 TINF2Q9BSI4 451 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 GBA2Q9HCG7 927 aaPredicted RBP11.97□□□□□ -0.49
CDH1-210ENST00000566612 ETNK2Q9NVF9 386 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 SLC17A7Q9P2U7 560 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 TUBGCP4Q9UGJ1 667 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 ZC3H4Q9UPT8 1303 aaKnown RBP11.97□□□□□ -0.49
CDH1-210ENST00000566612 RNF103O00237 685 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 TM9SF1O15321 606 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 CILPO75339 1184 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 HOXC6P09630 235 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 CPT1AP50416 773 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 PRAMEP78395 509 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 OGDHQ02218 1023 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 FSCBQ5H9T9 825 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 RABGAP1LQ5R372 815 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 UBAP2Q5T6F2 1119 aaKnown RBP11.97□□□□□ -0.49
CDH1-210ENST00000566612 PMF1Q6P1K2 205 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 TRIM67Q6ZTA4 783 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 TLK2Q86UE8 772 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 GSDMBQ8TAX9 411 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 PTPRN2Q92932 1015 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 CD101Q93033 1021 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 LPIN3Q9BQK8 851 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 KATNAL1Q9BW62 490 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 RBPJLQ9UBG7 517 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 BCAP29Q9UHQ4 241 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 SCOCQ9UIL1 159 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 GGA2Q9UJY4 613 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 NUDT5Q9UKK9 219 aa11.97□□□□□ -0.49
CDH1-210ENST00000566612 TCRBV9S1A1TA0A576 114 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 BNIP3LO60238 219 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 FAM155BO75949 473 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 THP07101 528 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 PAMP19021 973 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 AVPR1AP37288 418 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 OCRLQ01968 901 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 RASA2Q15283 850 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 SLC10A6Q3KNW5 377 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 WSCD1Q658N2 575 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 PIGZQ86VD9 579 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 ZDHHC14Q8IZN3 488 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 GAD1Q99259 594 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 PFDN4Q9NQP4 134 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 SLC38A7Q9NVC3 462 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 ABI2Q9NYB9 513 aaPredicted RBP11.96□□□□□ -0.49
CDH1-210ENST00000566612 ARHGEF37A1IGU5 675 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 FZD9O00144 591 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 GOT1P17174 413 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 TAC1P20366 129 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 IL1R2P27930 398 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 FDFT1P37268 417 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 POU5F1Q01860 360 aaKnown RBP11.96□□□□□ -0.49
CDH1-210ENST00000566612 MBTD1Q05BQ5 628 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 DBN1Q16643 649 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 KLC3Q6P597 504 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 BBS5Q8N3I7 341 aa11.96□□□□□ -0.49
CDH1-210ENST00000566612 MTBPQ96DY7 904 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms