RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 TRIM62Q9BVG3 475 aa12.02□□□□□ -0.49
KARS-207ENST00000566560 NACA2Q9H009 215 aa12.02□□□□□ -0.49
KARS-207ENST00000566560 TASP1Q9H6P5 420 aa12.02□□□□□ -0.49
KARS-207ENST00000566560 CCSER2Q9H7U1 834 aa12.02□□□□□ -0.49
KARS-207ENST00000566560 ASNSD1Q9NWL6 643 aa12.02□□□□□ -0.49
KARS-207ENST00000566560 OSER1Q9NX31 292 aa12.02□□□□□ -0.49
KARS-207ENST00000566560 CLIC5Q9NZA1 410 aa12.02□□□□□ -0.49
KARS-207ENST00000566560 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.02□□□□□ -0.49
KARS-207ENST00000566560 WDR35Q9P2L0 1181 aa12.02□□□□□ -0.49
KARS-207ENST00000566560 CHORDC1Q9UHD1 332 aaPredicted RBP12.02□□□□□ -0.49
KARS-207ENST00000566560 ZMYM5Q9UJ78 669 aa12.02□□□□□ -0.49
KARS-207ENST00000566560 CDH7Q9ULB5 785 aa12.02□□□□□ -0.49
KARS-207ENST00000566560 NENFQ9UMX5 172 aa12.02□□□□□ -0.49
KARS-207ENST00000566560 TRAV19A0A0A6YYK7 116 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 DAB1O75553 588 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 GRAP2O75791 330 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 OAS1P00973 400 aaKnown RBP12.01□□□□□ -0.49
KARS-207ENST00000566560 FTLP02792 175 aaPredicted RBP12.01□□□□□ -0.49
KARS-207ENST00000566560 PTMAP06454 111 aaKnown RBP12.01□□□□□ -0.49
KARS-207ENST00000566560 CKMP06732 381 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 RARGP13631 454 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 ABCB4P21439 1286 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 RRM1P23921 792 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 CYLC1P35663 651 aaPredicted RBP12.01□□□□□ -0.49
KARS-207ENST00000566560 SCNN1AP37088 669 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 AVPR1AP37288 418 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 SLC6A3Q01959 620 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 EFHC1Q5JVL4 640 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 HECTD3Q5T447 861 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 SNX30Q5VWJ9 437 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 BSPRYQ5W0U4 402 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 DNAJC24Q6P3W2 148 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 PHLDB2Q86SQ0 1253 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 TADA2BQ86TJ2 420 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 TMEM139Q8IV31 216 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 CCDC170Q8IYT3 715 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 MAB21L3Q8N8X9 362 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 C3orf20Q8ND61 904 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 CCDC112Q8NEF3 446 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 ZSCAN18Q8TBC5 510 aaPredicted RBP12.01□□□□□ -0.49
KARS-207ENST00000566560 EDEM1Q92611 657 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 MCRS1Q96EZ8 462 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 PDLIM2Q96JY6 352 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 CDK5RAP1Q96SZ6 601 aaKnown RBP12.01□□□□□ -0.49
KARS-207ENST00000566560 PHF7Q9BWX1 381 aaPredicted RBP12.01□□□□□ -0.49
KARS-207ENST00000566560 ISCUQ9H1K1 167 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 METTL5Q9NRN9 209 aaKnown RBP12.01□□□□□ -0.49
KARS-207ENST00000566560 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.01□□□□□ -0.49
KARS-207ENST00000566560 GDE1Q9NZC3 331 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 NR2E1Q9Y466 385 aa12.01□□□□□ -0.49
KARS-207ENST00000566560 SOBPA7XYQ1 873 aa12□□□□□ -0.49
KARS-207ENST00000566560 C2CD4DB7Z1M9 353 aa12□□□□□ -0.49
KARS-207ENST00000566560 CAPN9O14815 690 aa12□□□□□ -0.49
KARS-207ENST00000566560 COCHO43405 550 aa12□□□□□ -0.49
KARS-207ENST00000566560 NRDCO43847 1150 aa12□□□□□ -0.49
KARS-207ENST00000566560 IPO7O95373 1038 aaKnown RBP12□□□□□ -0.49
KARS-207ENST00000566560 OLFM2O95897 454 aa12□□□□□ -0.49
KARS-207ENST00000566560 GLI1P08151 1106 aa12□□□□□ -0.49
KARS-207ENST00000566560 MYBL1P10243 752 aa12□□□□□ -0.49
KARS-207ENST00000566560 MBL2P11226 248 aaPredicted RBP12□□□□□ -0.49
KARS-207ENST00000566560 NCAM1P13591 858 aa12□□□□□ -0.49
KARS-207ENST00000566560 PFKLP17858 780 aa12□□□□□ -0.49
KARS-207ENST00000566560 YWHAZP63104 245 aaKnown RBP12□□□□□ -0.49
KARS-207ENST00000566560 ZNF268Q14587 947 aaPredicted RBP12□□□□□ -0.49
KARS-207ENST00000566560 MTF1Q14872 753 aa12□□□□□ -0.49
KARS-207ENST00000566560 TAF5Q15542 800 aa12□□□□□ -0.49
KARS-207ENST00000566560 C10orf120Q5SQS8 335 aa12□□□□□ -0.49
KARS-207ENST00000566560 THSD4Q6ZMP0 1018 aa12□□□□□ -0.49
KARS-207ENST00000566560 CMTM8Q8IZV2 173 aa12□□□□□ -0.49
KARS-207ENST00000566560 ARL14EPQ8N8R7 260 aaPredicted RBP12□□□□□ -0.49
KARS-207ENST00000566560 RNF139Q8WU17 664 aa12□□□□□ -0.49
KARS-207ENST00000566560 ATXN2LQ8WWM7 1075 aaKnown RBP12□□□□□ -0.49
KARS-207ENST00000566560 ACSF2Q96CM8 615 aaPredicted RBP12□□□□□ -0.49
KARS-207ENST00000566560 KCTD12Q96CX2 325 aaKnown RBP12□□□□□ -0.49
KARS-207ENST00000566560 VCPIP1Q96JH7 1222 aa12□□□□□ -0.49
KARS-207ENST00000566560 RPGRIP1Q96KN7 1286 aa12□□□□□ -0.49
KARS-207ENST00000566560 SELENOOQ9BVL4 669 aa12□□□□□ -0.49
KARS-207ENST00000566560 POPDC2Q9HBU9 364 aa12□□□□□ -0.49
KARS-207ENST00000566560 ABCC13Q9NSE7 274 aa12□□□□□ -0.49
KARS-207ENST00000566560 OLA1Q9NTK5 396 aaKnown RBP12□□□□□ -0.49
KARS-207ENST00000566560 CNOT8Q9UFF9 292 aaKnown RBP12□□□□□ -0.49
KARS-207ENST00000566560 RASAL2Q9UJF2 1139 aa12□□□□□ -0.49
KARS-207ENST00000566560 TSR3Q9UJK0 312 aaKnown RBP12□□□□□ -0.49
KARS-207ENST00000566560 NUDT5Q9UKK9 219 aa12□□□□□ -0.49
KARS-207ENST00000566560 USTQ9Y2C2 406 aa12□□□□□ -0.49
KARS-207ENST00000566560 ZFP37Q9Y6Q3 630 aaPredicted RBP12□□□□□ -0.49
KARS-207ENST00000566560 KIF26AQ9ULI4 1882 aaPredicted RBP12□□□□□ -0.49
KARS-207ENST00000566560 SPTBN5Q9NRC6 3674 aaKnown RBP11.99□□□□□ -0.49
KARS-207ENST00000566560 MDM4O15151 490 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 NDUFA10O95299 355 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 GJB6O95452 261 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 PRAMEF12O95522 483 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 LAMP2P13473 410 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 HDCP19113 662 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 ATP5C1P36542 298 aaKnown RBP11.99□□□□□ -0.49
KARS-207ENST00000566560 GCGRP47871 477 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 RNASE9P60153 205 aaKnown RBP11.99□□□□□ -0.49
KARS-207ENST00000566560 CCDC173Q0VFZ6 552 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 EFEMP1Q12805 493 aa11.99□□□□□ -0.49
KARS-207ENST00000566560 SPA17Q15506 151 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms