RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 PLEKHA7Q6IQ23 1121 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 PTCRAQ6ISU1 281 aaPredicted RBP13.21□□□□□ -0.29
SF3B3-206ENST00000565990 RAD9BQ6WBX8 426 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 HNRNPLLQ8WVV9 542 aaKnown RBP13.21□□□□□ -0.29
SF3B3-206ENST00000565990 MRPS31Q92665 395 aaKnown RBP13.21□□□□□ -0.29
SF3B3-206ENST00000565990 NT5C3BQ969T7 300 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 SLC2A13Q96QE2 648 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 EIF3CQ99613 913 aaKnown RBP13.21□□□□□ -0.29
SF3B3-206ENST00000565990 C11orf70Q9BRQ4 267 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 DEF6Q9H4E7 631 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 SYNCQ9H7C4 482 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 POPDC2Q9HBU9 364 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 ABCC13Q9NSE7 274 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.21□□□□□ -0.29
SF3B3-206ENST00000565990 CDC23Q9UJX2 597 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 CDH7Q9ULB5 785 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 INTUQ9ULD6 942 aa13.21□□□□□ -0.29
SF3B3-206ENST00000565990 HELZP42694 1942 aaKnown RBP13.2□□□□□ -0.3
SF3B3-206ENST00000565990 C2orf78A6NCI8 922 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 SOWAHDA6NJG2 315 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 HSF2BPO75031 334 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 NDUFA10O95299 355 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 MYBL1P10243 752 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 LAMP2P13473 410 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 RARGP13631 454 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 HDCP19113 662 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 RRM1P23921 792 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 GALCP54803 685 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 SLC7A9P82251 487 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 MAMLD1Q13495 774 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 EIF4EBP2Q13542 120 aaPredicted RBP13.2□□□□□ -0.3
SF3B3-206ENST00000565990 NAA30Q147X3 362 aaPredicted RBP13.2□□□□□ -0.3
SF3B3-206ENST00000565990 TCEAL1Q15170 157 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 DNAAF5Q86Y56 855 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 NPAS3Q8IXF0 933 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 C3orf20Q8ND61 904 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 ATXN2LQ8WWM7 1075 aaKnown RBP13.2□□□□□ -0.3
SF3B3-206ENST00000565990 TRIM11Q96F44 468 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 PIWIL1Q96J94 861 aaKnown RBP13.2□□□□□ -0.3
SF3B3-206ENST00000565990 GCNAQ96QF7 691 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 SLC22A12Q96S37 553 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 CYP2S1Q96SQ9 504 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 CDK5RAP1Q96SZ6 601 aaKnown RBP13.2□□□□□ -0.3
SF3B3-206ENST00000565990 TRIM62Q9BVG3 475 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 PHF7Q9BWX1 381 aaPredicted RBP13.2□□□□□ -0.3
SF3B3-206ENST00000565990 CARD6Q9BX69 1037 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 TRPV4Q9HBA0 871 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 EPS15L1Q9UBC2 864 aa13.2□□□□□ -0.3
SF3B3-206ENST00000565990 MYO10Q9HD67 2058 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 COCHO43405 550 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 CYP1A2P05177 515 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 H2AFZP0C0S5 128 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 TMEM253P0C7T8 217 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 RALAP11233 206 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 BMP1P13497 986 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 TCF3P15923 654 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 CEBPBP17676 345 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 CYLC1P35663 651 aaPredicted RBP13.19□□□□□ -0.3
SF3B3-206ENST00000565990 ATP5C1P36542 298 aaKnown RBP13.19□□□□□ -0.3
SF3B3-206ENST00000565990 GPC5P78333 572 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 CYP4F8P98187 520 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 MTF1Q14872 753 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 ARHGAP15Q53QZ3 475 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 TEX35Q5T0J7 233 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 STXBP5Q5T5C0 1151 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 GPR158Q5T848 1215 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 SYPL2Q5VXT5 272 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 BTBD8Q5XKL5 378 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 MSANTD2Q6P1R3 559 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 TOGARAM2Q6ZUX3 1019 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 H2AFVQ71UI9 128 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 OTOP3Q7RTS5 596 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 TADA2BQ86TJ2 420 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 CMTM8Q8IZV2 173 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 MAB21L3Q8N8X9 362 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 RPGRIP1Q96KN7 1286 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 MYADMQ96S97 322 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 DDX23Q9BUQ8 820 aaKnown RBP13.19□□□□□ -0.3
SF3B3-206ENST00000565990 THAP2Q9H0W7 228 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 CCSER2Q9H7U1 834 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 PARVAQ9NVD7 372 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 THEGQ9P2T0 379 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 NAALADL1Q9UQQ1 740 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 FAM50BQ9Y247 325 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 PCDHA13Q9Y5I0 950 aa13.19□□□□□ -0.3
SF3B3-206ENST00000565990 V9GYY5 206 aaPredicted RBP13.19□□□□□ -0.3
SF3B3-206ENST00000565990 TRAV19A0A0A6YYK7 116 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 CTAGE9A4FU28 777 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 TMEM191CA6NGB0 347 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 TLR5O60602 858 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 ERLIN1O75477 346 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 TBX18O95935 607 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 ABL1P00519 1130 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 IGLV3-25P01717 112 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 KRT3P12035 628 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 MCM3P25205 808 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 NOS2P35228 1153 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 RFC1P35251 1148 aaPredicted RBP13.18□□□□□ -0.3
SF3B3-206ENST00000565990 MATKP42679 507 aa13.18□□□□□ -0.3
SF3B3-206ENST00000565990 MAGEA1P43355 309 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms