RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 DEUP1Q05D60 604 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 PLD1Q13393 1074 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 TAF12Q16514 161 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 PDE12Q6L8Q7 609 aaKnown RBP19.55■□□□□ 0.72
COMMD4-213ENST00000565834 LILRA6Q6PI73 481 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 CCDC149Q6ZUS6 474 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 BNIPLQ7Z465 357 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 CCDC50Q8IVM0 306 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 TDHQ8IZJ6 230 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 RBM41Q96IZ5 413 aaKnown RBP19.55■□□□□ 0.72
COMMD4-213ENST00000565834 CERS4Q9HA82 394 aa19.55■□□□□ 0.72
COMMD4-213ENST00000565834 TTC7AQ9ULT0 858 aaPredicted RBP19.55■□□□□ 0.72
COMMD4-213ENST00000565834 SYNJ2BP-COX16A0A087WUM0 186 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 CTAGE15A4D2H0 777 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 CTAGE8P0CG41 777 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 RARAP10276 462 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 ATXN1P54253 815 aaKnown RBP19.54■□□□□ 0.72
COMMD4-213ENST00000565834 NME3Q13232 169 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 CLUL1Q15846 466 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 BOLA3Q53S33 107 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 KCNT1Q5JUK3 1230 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 AADACL2Q6P093 401 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 CYP4V2Q6ZWL3 525 aaPredicted RBP19.54■□□□□ 0.72
COMMD4-213ENST00000565834 CTAGE6Q86UF2 777 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 CTAGE4Q8IX94 777 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 RCOR2Q8IZ40 523 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 ADAM32Q8TC27 787 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 DQX1Q8TE96 717 aaKnown RBP19.54■□□□□ 0.72
COMMD4-213ENST00000565834 RNF139Q8WU17 664 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 ACSF2Q96CM8 615 aaPredicted RBP19.54■□□□□ 0.72
COMMD4-213ENST00000565834 PGAP3Q96FM1 320 aaPredicted RBP19.54■□□□□ 0.72
COMMD4-213ENST00000565834 NAP1L3Q99457 506 aaPredicted RBP19.54■□□□□ 0.72
COMMD4-213ENST00000565834 DDIT4Q9NX09 232 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 COX16Q9P0S2 106 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 CALCOCO1Q9P1Z2 691 aa19.54■□□□□ 0.72
COMMD4-213ENST00000565834 LRRD1A4D1F6 860 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 F9P00740 461 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 FGGP02679 453 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 CETN2P41208 172 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 RSRC2Q7L4I2 434 aaKnown RBP19.53■□□□□ 0.72
COMMD4-213ENST00000565834 ZNF572Q7Z3I7 529 aaPredicted RBP19.53■□□□□ 0.72
COMMD4-213ENST00000565834 TAC4Q86UU9 113 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 KREMEN2Q8NCW0 462 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 PDZD8Q8NEN9 1154 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 TEKT4Q8WW24 435 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 HSPH1Q92598 858 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 SLC28A3Q9HAS3 691 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 PIGVQ9NUD9 493 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 OSER1Q9NX31 292 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 CLIC5Q9NZA1 410 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 TNRC18O15417 2968 aaPredicted RBP19.53■□□□□ 0.72
COMMD4-213ENST00000565834 ATG2AQ2TAZ0 1938 aa19.53■□□□□ 0.72
COMMD4-213ENST00000565834 PI4K2BG5E9Z4 385 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 RALAP11233 206 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 HMGA1P17096 107 aaKnown RBP19.52■□□□□ 0.72
COMMD4-213ENST00000565834 GBP1P32455 592 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 RGS19P49795 217 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 LONRF2Q1L5Z9 754 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 SND1Q7KZF4 910 aaKnown RBP eCLIP19.52■□□□□ 0.72
COMMD4-213ENST00000565834 ITIH5Q86UX2 942 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 FAM131BQ86XD5 332 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 ARNTL2Q8WYA1 636 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 OVCA2Q8WZ82 227 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 RAPGEF5Q92565 580 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 RNF25Q96BH1 459 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-213ENST00000565834 TRMT2BQ96GJ1 504 aaKnown RBP19.52■□□□□ 0.72
COMMD4-213ENST00000565834 RPGRIP1Q96KN7 1286 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 MYRFLQ96LU7 910 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 SNRNP25Q9BV90 132 aaKnown RBP19.52■□□□□ 0.72
COMMD4-213ENST00000565834 SMOC2Q9H3U7 446 aa19.52■□□□□ 0.72
COMMD4-213ENST00000565834 MDM4O15151 490 aa19.52■□□□□ 0.71
COMMD4-213ENST00000565834 LRG1P02750 347 aa19.52■□□□□ 0.71
COMMD4-213ENST00000565834 C8AP07357 584 aa19.52■□□□□ 0.71
COMMD4-213ENST00000565834 ZDHHC11BP0C7U3 371 aa19.52■□□□□ 0.71
COMMD4-213ENST00000565834 CLCN4P51793 760 aa19.52■□□□□ 0.71
COMMD4-213ENST00000565834 COPS2P61201 443 aa19.52■□□□□ 0.71
COMMD4-213ENST00000565834 ERMARDQ5T6L9 678 aa19.52■□□□□ 0.71
COMMD4-213ENST00000565834 KCTD6Q8NC69 237 aa19.52■□□□□ 0.71
COMMD4-213ENST00000565834 LRRN4CLQ8ND94 238 aa19.52■□□□□ 0.71
COMMD4-213ENST00000565834 CMASQ8NFW8 434 aaPredicted RBP19.52■□□□□ 0.71
COMMD4-213ENST00000565834 PSMG2Q969U7 264 aa19.52■□□□□ 0.71
COMMD4-213ENST00000565834 ZNF512Q96ME7 567 aaPredicted RBP19.52■□□□□ 0.71
COMMD4-213ENST00000565834 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.52■□□□□ 0.713e-10■■■■■ 33.7
COMMD4-213ENST00000565834 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.52■□□□□ 0.71
COMMD4-213ENST00000565834 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.52■□□□□ 0.712e-7■■□□□ 14.4
COMMD4-213ENST00000565834 C1RP00736 705 aa19.51■□□□□ 0.71
COMMD4-213ENST00000565834 IGLV3-25P01717 112 aa19.51■□□□□ 0.71
COMMD4-213ENST00000565834 RARGP13631 454 aa19.51■□□□□ 0.71
COMMD4-213ENST00000565834 MSANTD2Q6P1R3 559 aa19.51■□□□□ 0.71
COMMD4-213ENST00000565834 MFSD7Q6UXD7 560 aa19.51■□□□□ 0.71
COMMD4-213ENST00000565834 SPOCD1Q6ZMY3 1216 aa19.51■□□□□ 0.71
COMMD4-213ENST00000565834 DNAJB7Q7Z6W7 309 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-213ENST00000565834 SLC13A5Q86YT5 568 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-213ENST00000565834 CCDC185Q8N715 623 aa19.51■□□□□ 0.71
COMMD4-213ENST00000565834 LMAN2LQ9H0V9 348 aa19.51■□□□□ 0.71
COMMD4-213ENST00000565834 WDR6Q9NNW5 1121 aaKnown RBP19.51■□□□□ 0.71
COMMD4-213ENST00000565834 OLA1Q9NTK5 396 aaKnown RBP19.51■□□□□ 0.71
COMMD4-213ENST00000565834 UXTQ9UBK9 157 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-213ENST00000565834 NUDT5Q9UKK9 219 aa19.51■□□□□ 0.71
COMMD4-213ENST00000565834 ASB3Q9Y575 518 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms