RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 HTR3DQ70Z44 454 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 BMP8AQ7Z5Y6 402 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 GAS2L3Q86XJ1 694 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 OR8K1Q8NGG5 319 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 FAM149B1Q96BN6 582 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 RSPRY1Q96DX4 576 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 SERPINB11Q96P15 392 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 DNAJC7Q99615 494 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 C1QTNF1Q9BXJ1 281 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 PLA2G2FQ9BZM2 168 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 SMOC2Q9H3U7 446 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 C8orf33Q9H7E9 229 aaPredicted RBP17.46■□□□□ 0.39
RNF40-206ENST00000564260 SH3BP1Q9Y3L3 701 aa17.46■□□□□ 0.39
RNF40-206ENST00000564260 ANAPC1Q9H1A4 1944 aa17.45■□□□□ 0.38
RNF40-206ENST00000564260 CAPN9O14815 690 aa17.45■□□□□ 0.38
RNF40-206ENST00000564260 NFATC1O95644 943 aa17.45■□□□□ 0.38
RNF40-206ENST00000564260 TNFAIP3P21580 790 aa17.45■□□□□ 0.38
RNF40-206ENST00000564260 CASP14P31944 242 aa17.45■□□□□ 0.38
RNF40-206ENST00000564260 PGFP49763 221 aa17.45■□□□□ 0.38
RNF40-206ENST00000564260 NAA35Q5VZE5 725 aa17.45■□□□□ 0.38
RNF40-206ENST00000564260 CSGALNACT1Q8TDX6 532 aa17.45■□□□□ 0.38
RNF40-206ENST00000564260 LRRC3BQ96PB8 259 aa17.45■□□□□ 0.38
RNF40-206ENST00000564260 SLC2A13Q96QE2 648 aa17.45■□□□□ 0.38
RNF40-206ENST00000564260 HAUS4Q9H6D7 363 aa17.45■□□□□ 0.38
RNF40-206ENST00000564260 ZNHIT6Q9NWK9 470 aaKnown RBP17.45■□□□□ 0.38
RNF40-206ENST00000564260 MAN2B1O00754 1011 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 ERBB2P04626 1255 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 NCAM1P13591 858 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 IFNAR2P48551 515 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 NR1H3Q13133 447 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 TRIP4Q15650 581 aaPredicted RBP17.44■□□□□ 0.38
RNF40-206ENST00000564260 ACBD5Q5T8D3 534 aaPredicted RBP17.44■□□□□ 0.38
RNF40-206ENST00000564260 NUGGCQ68CJ6 796 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 OR6B2Q6IFH4 312 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 FAM183BPQ6ZVS7 135 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 XYLT1Q86Y38 959 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 UNC45BQ8IWX7 931 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 CPA6Q8N4T0 437 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 AZIN2Q96A70 460 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 TRIM11Q96F44 468 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 NELL2Q99435 816 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 SMG9Q9H0W8 520 aaKnown RBP17.44■□□□□ 0.38
RNF40-206ENST00000564260 ARHGEF3Q9NR81 526 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 DUS2Q9NX74 493 aaKnown RBP17.44■□□□□ 0.38
RNF40-206ENST00000564260 CFAP97Q9P2B7 532 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 FBXL21Q9UKT6 434 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 CUL9Q8IWT3 2517 aa17.44■□□□□ 0.38
RNF40-206ENST00000564260 DLL1O00548 723 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 NARSO43776 548 aaKnown RBP17.43■□□□□ 0.38
RNF40-206ENST00000564260 GPR37L1O60883 481 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 DAB1O75553 588 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 TBX18O95935 607 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 SLC2A3P11169 496 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 NOS2P35228 1153 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 HARS2P49590 506 aaKnown RBP17.43■□□□□ 0.38
RNF40-206ENST00000564260 ZXDBP98169 803 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 CDK17Q00537 523 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 EFEMP1Q12805 493 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 RUNX3Q13761 415 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 GRM2Q14416 872 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 ITPRIPL2Q3MIP1 535 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 HGSNATQ68CP4 663 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 ACAD10Q6JQN1 1059 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 RALGPS2Q86X27 583 aaPredicted RBP17.43■□□□□ 0.38
RNF40-206ENST00000564260 CLEC4CQ8WTT0 213 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 CPA5Q8WXQ8 436 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 ASIC4Q96FT7 647 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 OSBPL6Q9BZF3 934 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 GKN1Q9NS71 199 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 SMPD4Q9NXE4 827 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 ADAM22Q9P0K1 906 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 RASAL2Q9UJF2 1139 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 STAP1Q9ULZ2 295 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 TLR6Q9Y2C9 796 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 MRPS17Q9Y2R5 130 aaKnown RBP17.43■□□□□ 0.38
RNF40-206ENST00000564260 PAXBP1Q9Y5B6 917 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 MYO16Q9Y6X6 1858 aa17.43■□□□□ 0.38
RNF40-206ENST00000564260 KIF26AQ9ULI4 1882 aaPredicted RBP17.42■□□□□ 0.38
RNF40-206ENST00000564260 SSU72P8A0A1W2PR75 194 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 MFAP3LO75121 409 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 IGLV3-25P01717 112 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 IGLV3-27P01718 113 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 FYNP06241 537 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 MYBL1P10243 752 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 GBP1P32455 592 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 CHKAP35790 457 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 MATKP42679 507 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 ZNF75DP51815 510 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 STARD6P59095 220 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 TBX2Q13207 712 aaPredicted RBP17.42■□□□□ 0.38
RNF40-206ENST00000564260 MLF2Q15773 248 aaPredicted RBP17.42■□□□□ 0.38
RNF40-206ENST00000564260 EML3Q32P44 896 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 SLC44A4Q53GD3 710 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 TDRD12Q587J7 1177 aaKnown RBP17.42■□□□□ 0.38
RNF40-206ENST00000564260 Q6ZNB5 142 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 HFE2Q6ZVN8 426 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 MON1BQ7L1V2 547 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 ZNF571Q7Z3V5 609 aaPredicted RBP17.42■□□□□ 0.38
RNF40-206ENST00000564260 MIB1Q86YT6 1006 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 C3orf20Q8ND61 904 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms