RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 HINFPQ9BQA5 517 aa12.82□□□□□ -0.36
NSMCE1-204ENST00000563273 ULBP1Q9BZM6 244 aa12.82□□□□□ -0.36
NSMCE1-204ENST00000563273 THAP9Q9H5L6 903 aa12.82□□□□□ -0.36
NSMCE1-204ENST00000563273 DEC1Q9P2X7 70 aa12.82□□□□□ -0.36
NSMCE1-204ENST00000563273 DACH1Q9UI36 760 aa12.82□□□□□ -0.36
NSMCE1-204ENST00000563273 STRIP2Q9ULQ0 834 aa12.82□□□□□ -0.36
NSMCE1-204ENST00000563273 STARD13Q9Y3M8 1113 aa12.82□□□□□ -0.36
NSMCE1-204ENST00000563273 RNF225M0QZC1 329 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 TULP2O00295 520 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 SCAMP3O14828 347 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 AXIN1O15169 862 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 FOXD2O60548 495 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 TULP3O75386 442 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 FBXO21O94952 628 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 CHKAP35790 457 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 KIR2DL1P43626 348 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 SLC6A11P48066 632 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 RPL34P49207 117 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 DGKEP52429 567 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 ADIGQ0VDE8 80 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 RRAGAQ7L523 313 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 TRMT11Q7Z4G4 463 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 C11orf74Q86VG3 221 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 RASSF3Q86WH2 238 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 FAM114A1Q8IWE2 563 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 SIX6OS1Q8N1H7 587 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 TERB1Q8NA31 727 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 PLD4Q96BZ4 506 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 IPO9Q96P70 1041 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 XPO6Q96QU8 1125 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 ZSWIM1Q9BR11 485 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 NUP62CLQ9H1M0 184 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 ABCC13Q9NSE7 274 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 MARCH2Q9P0N8 246 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 FBXO10Q9UK96 956 aa12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 HBS1LQ9Y450 684 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-204ENST00000563273 MDM4O15151 490 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 RPP40O75818 363 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 LATS1O95835 1130 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 PENKP01210 267 aaPredicted RBP12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 KLKB1P03952 638 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 TGM1P22735 817 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 MFAP3P55082 362 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 DAOAP59103 153 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 ZNF445P59923 1031 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 MESP2Q0VG99 397 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 EFEMP1Q12805 493 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 TRIP4Q15650 581 aaPredicted RBP12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 CRY1Q16526 586 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 EXOC3L4Q17RC7 722 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 ANO4Q32M45 955 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 EOGTQ5NDL2 527 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 BSPRYQ5W0U4 402 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 HEATR6Q6AI08 1181 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 GRAMD4Q6IC98 578 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 MSANTD2Q6P1R3 559 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 TRIM65Q6PJ69 517 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 GBP6Q6ZN66 633 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 RSRC2Q7L4I2 434 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 CACNA2D4Q7Z3S7 1137 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 MIB1Q86YT6 1006 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 FAM217AQ8IXS0 508 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 CPXM2Q8N436 756 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 IL17RCQ8NAC3 791 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 UBA3Q8TBC4 463 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 STK32AQ8WU08 396 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 ZC3H10Q96K80 434 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 HHIPQ96QV1 700 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 BBS2Q9BXC9 721 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 IRX2Q9BZI1 471 aaPredicted RBP12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 UBE2TQ9NPD8 197 aaPredicted RBP12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 LMBRD1Q9NUN5 540 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 APEX2Q9UBZ4 518 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 RASAL2Q9UJF2 1139 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 NUDT5Q9UKK9 219 aa12.8□□□□□ -0.36
NSMCE1-204ENST00000563273 TBC1D3BA6NDS4 549 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 M0QYV0 167 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 SART1O43290 800 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 MED7O43513 233 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 ALDH1A2O94788 518 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 TYRP14679 529 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 SDHBP21912 280 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 BRD2P25440 801 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 CORO1AP31146 461 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 ACADSBP45954 432 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 LMNB2Q03252 620 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 MAN2A1Q16706 1144 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 DPCR1Q3MIW9 517 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 C2orf27AQ580R0 203 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 PMF1Q6P1K2 205 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 PRR23BQ6ZRT6 265 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 CEP68Q76N32 757 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 BEND5Q7L4P6 421 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 KIAA2013Q8IYS2 634 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 DCLK2Q8N568 766 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 TSTD1Q8NFU3 115 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 GBP4Q96PP9 640 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 DNAJC17Q9NVM6 304 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 STOML2Q9UJZ1 356 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms