RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 DPYDQ12882 1025 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 SPDYCQ5MJ68 293 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 PEAR1Q5VY43 1037 aaPredicted RBP17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 LYSMD4Q5XG99 296 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 TPGS1Q6ZTW0 290 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 TOGARAM2Q6ZUX3 1019 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 INTS8Q75QN2 995 aaKnown RBP17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 SPATA32Q96LK8 384 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 NT5C1AQ9BXI3 368 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 IMPG2Q9BZV3 1241 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 NIF3L1Q9GZT8 377 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CYP3A43Q9HB55 503 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 PNPLA8Q9NP80 782 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 LSM7Q9UK45 103 aaKnown RBP17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 PILRBQ9UKJ0 227 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 WASF3Q9UPY6 502 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 ZDHHC9Q9Y397 364 aa17.6■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 AKAP13Q12802 2813 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 KIF20AO95235 890 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 CSRP1P21291 193 aaKnown RBP17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 SYKP43405 635 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 KIF11P52732 1056 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 GOLGA8FQ08AF8 430 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 GOLGA8DPQ0D2H9 430 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 LMAN2Q12907 356 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 BYSLQ13895 437 aaKnown RBP17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 UAP1L1Q3KQV9 507 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 PPP1R26Q5T8A7 1209 aaPredicted RBP17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 KIAA1211LQ6NV74 962 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 KLHDC10Q6PID8 442 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 SLC23A3Q6PIS1 610 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 Q6ZNB5 142 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 NUDT18Q6ZVK8 323 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 SCD5Q86SK9 330 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 FAM186BQ8IYM0 893 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 ERLEC1Q96DZ1 483 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 XPO6Q96QU8 1125 aaKnown RBP17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 MMRN2Q9H8L6 949 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 FSCN3Q9NQT6 498 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 WDR35Q9P2L0 1181 aa17.59■□□□□ 0.41
VPS9D1-AS1-201ENST00000562298 AP5Z1O43299 807 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 CISD3P0C7P0 127 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 CEACAM1P13688 526 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 ENGP17813 658 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 NDUFV2P19404 249 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 TRIM21P19474 475 aaKnown RBP17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 MAPK8P45983 427 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 RPL6Q02878 288 aaKnown RBP17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 ZCWPW2Q504Y3 356 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 C10orf120Q5SQS8 335 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 CCDC186Q7Z3E2 898 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 CHPFQ8IZ52 775 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 DEFB119Q8N690 84 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 BHMTQ93088 406 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 GABRG3Q99928 467 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 NUSAP1Q9BXS6 441 aaKnown RBP17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 DNMT3LQ9UJW3 386 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 NAGPAQ9UK23 515 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 RAD54BQ9Y620 910 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 USP3Q9Y6I4 520 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 MYO18AQ92614 2054 aaKnown RBP17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 CEP192Q8TEP8 1941 aa17.58■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 IGHV1OR15-9A0A0B4J2B8 117 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 STC2O76061 302 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 KLKB1P03952 638 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 KRT13P13646 458 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 PLA2G4AP47712 749 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 DGKGP49619 791 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 MCCD1P59942 119 aaPredicted RBP17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 ENPEPQ07075 957 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 FOXC1Q12948 553 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 ZNF394Q53GI3 561 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 GUF1Q8N442 669 aaKnown RBP17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 DEFB124Q8NES8 71 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 IPO4Q8TEX9 1081 aaKnown RBP17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 SEMA4DQ92854 862 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 DUSP16Q9BY84 665 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 SLC6A17Q9H1V8 727 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 GOLPH3LQ9H4A5 285 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 TMEM8AQ9HCN3 771 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 CD93Q9NPY3 652 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 PLK2Q9NYY3 685 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 PCDH15Q96QU1 1955 aa17.57■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 TOP3BO95985 862 aaKnown RBP17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 CFIP05156 583 aa17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 SPINK2P20155 84 aa17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 HOXD12P35452 270 aa17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 PSMC2P35998 433 aaKnown RBP17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 DPP6P42658 865 aa17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 KRT85P78386 507 aa17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 ZNF33AQ06730 810 aa17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 ADAM9Q13443 819 aa17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 SLC36A4Q6YBV0 504 aa17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 KRBA2Q6ZNG9 492 aa17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 SLC41A1Q8IVJ1 513 aa17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 ZNF276Q8N554 614 aa17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 CCDC47Q96A33 483 aaKnown RBP17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 EEF2KMTQ96G04 330 aa17.56■□□□□ 0.4
VPS9D1-AS1-201ENST00000562298 CACNA2D2Q9NY47 1150 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms