RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 MAGEA6P43360 314 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 MAGEA8P43361 318 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 FOLH1Q04609 750 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 DLG1Q12959 904 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 TUBB3Q13509 450 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 UBAP2LQ14157 1087 aaKnown RBP19.31■□□□□ 0.68
BBS4-204ENST00000562084 C4orf22Q6V702 233 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 IL31RAQ8NI17 732 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 DDI1Q8WTU0 396 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 ACSF2Q96CM8 615 aaPredicted RBP19.31■□□□□ 0.68
BBS4-204ENST00000562084 KCNK16Q96T55 309 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 SH2D3AQ9BRG2 576 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 CCPG1Q9ULG6 757 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 DMTF1Q9Y222 760 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 CLEC11AQ9Y240 323 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 NUB1Q9Y5A7 615 aa19.31■□□□□ 0.68
BBS4-204ENST00000562084 TCP10L2B9ZVM9 353 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 LRCH4O75427 683 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 DESP17661 470 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 PEX2P28328 305 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 FDFT1P37268 417 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 MRPS9P82933 396 aaKnown RBP19.3■□□□□ 0.68
BBS4-204ENST00000562084 FAM47CQ5HY64 1035 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 LPCAT4Q643R3 524 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 LMBRD2Q68DH5 695 aaPredicted RBP19.3■□□□□ 0.68
BBS4-204ENST00000562084 TRIM74Q86UV6 250 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 TRIM73Q86UV7 250 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 AHI1Q8N157 1196 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 CMASQ8NFW8 434 aaPredicted RBP19.3■□□□□ 0.68
BBS4-204ENST00000562084 ACMSDQ8TDX5 336 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 ZC3H15Q8WU90 426 aaKnown RBP19.3■□□□□ 0.68
BBS4-204ENST00000562084 ATP6V0A1Q93050 837 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 CEP170P1Q96L14 293 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 PDLIM7Q9NR12 457 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 ETNK2Q9NVF9 386 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 RBAKQ9NYW8 714 aaPredicted RBP19.3■□□□□ 0.68
BBS4-204ENST00000562084 TMOD2Q9NZR1 351 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 COL20A1Q9P218 1284 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 SAE1Q9UBE0 346 aaPredicted RBP19.3■□□□□ 0.68
BBS4-204ENST00000562084 ZC3H7BQ9UGR2 993 aaKnown RBP19.3■□□□□ 0.68
BBS4-204ENST00000562084 DTNAQ9Y4J8 743 aa19.3■□□□□ 0.68
BBS4-204ENST00000562084 CLPTM1O96005 669 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 CPA3P15088 417 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 OSBPP22059 807 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 USP46P62068 366 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 YWHAZP63104 245 aaKnown RBP19.29■□□□□ 0.68
BBS4-204ENST00000562084 HPCAP84074 193 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 SLC25A3Q00325 362 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 NOMO1Q15155 1222 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 C1orf228Q6PIY5 440 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 RNF111Q6ZNA4 994 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 TAS1R3Q7RTX0 852 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 KBTBD6Q86V97 674 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 FBXW8Q8N3Y1 598 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 PPP1R14CQ8TAE6 165 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 ACER1Q8TDN7 264 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 FAF2Q96CS3 445 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 CFAP36Q96G28 342 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 CSRNP1Q96S65 589 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 ZNF696Q9H7X3 374 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.29■□□□□ 0.68
BBS4-204ENST00000562084 POPDC2Q9HBU9 364 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 BCAP29Q9UHQ4 241 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 PADI4Q9UM07 663 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 PCDHA10Q9Y5I2 948 aa19.29■□□□□ 0.68
BBS4-204ENST00000562084 APOEP02649 317 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 KITP10721 976 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 RAG1P15918 1043 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 ALOX15P16050 662 aaPredicted RBP19.28■□□□□ 0.68
BBS4-204ENST00000562084 SSTR3P32745 418 aaPredicted RBP19.28■□□□□ 0.68
BBS4-204ENST00000562084 SERPINB6P35237 376 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 GABRB2P47870 512 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 HSPA13P48723 471 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 NLRP11P59045 1033 aaKnown RBP19.28■□□□□ 0.68
BBS4-204ENST00000562084 SNAPC2Q13487 334 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 NCOA4Q13772 614 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 CYLC2Q14093 348 aaPredicted RBP19.28■□□□□ 0.68
BBS4-204ENST00000562084 TTLL12Q14166 644 aaPredicted RBP19.28■□□□□ 0.68
BBS4-204ENST00000562084 TFDP2Q14188 446 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 DARS2Q6PI48 645 aaKnown RBP19.28■□□□□ 0.68
BBS4-204ENST00000562084 KCTD6Q8NC69 237 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 SPATA18Q8TC71 538 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 NMD3Q96D46 503 aaKnown RBP19.28■□□□□ 0.68
BBS4-204ENST00000562084 RTP4Q96DX8 246 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 PSMD13Q9UNM6 376 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 POMPQ9Y244 141 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 ARID2Q68CP9 1835 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 CCDC195A0A1B0GUA6 201 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 MEI4A8MW99 385 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 VILLO15195 856 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 ZSCAN9O15535 394 aaPredicted RBP19.28■□□□□ 0.68
BBS4-204ENST00000562084 TNFAIP8O95379 198 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 CCNE2O96020 404 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 KRT3P12035 628 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 SULT2A1Q06520 285 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 SFSWAPQ12872 951 aaKnown RBP19.28■□□□□ 0.68
BBS4-204ENST00000562084 GRM1Q13255 1194 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 USP41Q3LFD5 358 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 FKBP1CQ5VVH2 108 aa19.28■□□□□ 0.68
BBS4-204ENST00000562084 CES4AQ5XG92 561 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms