RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 KATNA1O75449 491 aa3.38□□□□□ -1.87
SPG11-222ENST00000560435 ZNF432O94892 652 aa3.38□□□□□ -1.87
SPG11-222ENST00000560435 ADRA1DP25100 572 aa3.38□□□□□ -1.87
SPG11-222ENST00000560435 KCNJ4P48050 445 aa3.38□□□□□ -1.87
SPG11-222ENST00000560435 DEUP1Q05D60 604 aa3.38□□□□□ -1.87
SPG11-222ENST00000560435 TMEM240Q5SV17 173 aa3.38□□□□□ -1.87
SPG11-222ENST00000560435 ELP5Q8TE02 316 aa3.38□□□□□ -1.87
SPG11-222ENST00000560435 OIT3Q8WWZ8 545 aa3.38□□□□□ -1.87
SPG11-222ENST00000560435 P2RY11Q96G91 374 aa3.38□□□□□ -1.87
SPG11-222ENST00000560435 USP29Q9HBJ7 922 aa3.38□□□□□ -1.87
SPG11-222ENST00000560435 AGO4Q9HCK5 861 aaKnown RBP3.38□□□□□ -1.87
SPG11-222ENST00000560435 FZD3Q9NPG1 666 aa3.38□□□□□ -1.87
SPG11-222ENST00000560435 DNMT3BQ9UBC3 853 aaKnown RBP3.38□□□□□ -1.87
SPG11-222ENST00000560435 ASAP1Q9ULH1 1129 aa3.38□□□□□ -1.87
SPG11-222ENST00000560435 A0A1W2PPC1 479 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 BTN3A1O00481 513 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 ALDH2P05091 517 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 CD19P15391 556 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 HOXA11P31270 313 aaPredicted RBP3.37□□□□□ -1.87
SPG11-222ENST00000560435 RAB1AP62820 205 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 TXNL4AP83876 142 aaKnown RBP3.37□□□□□ -1.87
SPG11-222ENST00000560435 FGL2Q14314 439 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 ST3GAL2Q16842 350 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 INSCQ1MX18 579 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 OTUD3Q5T2D3 398 aaPredicted RBP3.37□□□□□ -1.87
SPG11-222ENST00000560435 GIMAP6Q6P9H5 292 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 SLC39A5Q6ZMH5 540 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 TFAP2DQ7Z6R9 452 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 CHPFQ8IZ52 775 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 MPP5Q8N3R9 675 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 OR6B3Q8NGW1 331 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 PIGKQ92643 395 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 ZBTB45Q96K62 511 aaPredicted RBP3.37□□□□□ -1.87
SPG11-222ENST00000560435 CGRRF1Q99675 332 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 PLSCR4Q9NRQ2 329 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 NKX1-2Q9UD57 310 aaPredicted RBP3.37□□□□□ -1.87
SPG11-222ENST00000560435 ANAPC4Q9UJX5 808 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 AGO2Q9UKV8 859 aaKnown RBP3.37□□□□□ -1.87
SPG11-222ENST00000560435 SPEF1Q9Y4P9 236 aa3.37□□□□□ -1.87
SPG11-222ENST00000560435 A0A088AWK7 358 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 TMEM233B4DJY2 109 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 RGS10O43665 173 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 PRAMEF2O60811 474 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 RASAL1O95294 804 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 PAPSS2O95340 614 aaPredicted RBP3.36□□□□□ -1.87
SPG11-222ENST00000560435 NPR1P16066 1061 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 AKAP5P24588 427 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 GATMP50440 423 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 JAK3P52333 1124 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 SLC13A2Q13183 592 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 RAB32Q13637 225 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 CACHD1Q5VU97 1274 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 NUGGCQ68CJ6 796 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 RBM44Q6ZP01 1051 aaKnown RBP3.36□□□□□ -1.87
SPG11-222ENST00000560435 PPP1R9BQ96SB3 815 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 MOV10Q9HCE1 1003 aaKnown RBP3.36□□□□□ -1.87
SPG11-222ENST00000560435 STAP2Q9UGK3 403 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 RIMKLBQ9ULI2 386 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 PAXBP1Q9Y5B6 917 aa3.36□□□□□ -1.87
SPG11-222ENST00000560435 ZNF335Q9H4Z2 1342 aaPredicted RBP3.36□□□□□ -1.87
SPG11-222ENST00000560435 PODXLO00592 558 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 PRPF4O43172 522 aaKnown RBP eCLIP3.35□□□□□ -1.87
SPG11-222ENST00000560435 CCP110O43303 1012 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 SNUPNO95149 360 aaKnown RBP3.35□□□□□ -1.87
SPG11-222ENST00000560435 IL33O95760 270 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 CGAP01215 116 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 ACAA1P09110 424 aaPredicted RBP3.35□□□□□ -1.87
SPG11-222ENST00000560435 HGFP14210 728 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 RHCEP18577 417 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 TFEBP19484 476 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 CDK11BP21127 795 aaKnown RBP3.35□□□□□ -1.87
SPG11-222ENST00000560435 PGDP52209 483 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 DSCR9P59020 149 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 SLC4A8Q2Y0W8 1093 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 ZDHHC24Q6UX98 284 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 RTL10Q7L3V2 364 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 SRGAP1Q7Z6B7 1085 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 METTL25Q8N6Q8 603 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 FAM71DQ8N9W8 422 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 LPAR1Q92633 364 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 HSPBAP1Q96EW2 488 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 VPS50Q96JG6 964 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 MAP3K14Q99558 947 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 PIMREGQ9BSJ6 248 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 RMI1Q9H9A7 625 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 SMURF2Q9HAU4 748 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 THSD1Q9NS62 852 aa3.35□□□□□ -1.87
SPG11-222ENST00000560435 C16orf96A6NNT2 1141 aa3.34□□□□□ -1.87
SPG11-222ENST00000560435 H0YGN5 161 aa3.34□□□□□ -1.87
SPG11-222ENST00000560435 AGPSO00116 658 aa3.34□□□□□ -1.87
SPG11-222ENST00000560435 RRP9O43818 475 aaKnown RBP3.34□□□□□ -1.87
SPG11-222ENST00000560435 TBC1D4O60343 1298 aa3.34□□□□□ -1.87
SPG11-222ENST00000560435 UGDHO60701 494 aa3.34□□□□□ -1.87
SPG11-222ENST00000560435 CDKN1CP49918 316 aaPredicted RBP3.34□□□□□ -1.87
SPG11-222ENST00000560435 WDR5P61964 334 aaKnown RBP3.34□□□□□ -1.87
SPG11-222ENST00000560435 CCDC15Q0P6D6 951 aa3.34□□□□□ -1.87
SPG11-222ENST00000560435 MTA1Q13330 715 aa3.34□□□□□ -1.87
SPG11-222ENST00000560435 TTLL5Q6EMB2 1281 aa3.34□□□□□ -1.87
SPG11-222ENST00000560435 TRILQ7L0X0 811 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms