RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 MAIP1Q8WWC4 291 aa6.72□□□□□ -1.33
SPG11-221ENST00000560299 MYLIPQ8WY64 445 aa6.72□□□□□ -1.33
SPG11-221ENST00000560299 OVCA2Q8WZ82 227 aa6.72□□□□□ -1.33
SPG11-221ENST00000560299 FBXO32Q969P5 355 aa6.72□□□□□ -1.33
SPG11-221ENST00000560299 RPGRIP1Q96KN7 1286 aa6.72□□□□□ -1.33
SPG11-221ENST00000560299 OSBPL9Q96SU4 736 aa6.72□□□□□ -1.33
SPG11-221ENST00000560299 TLR10Q9BXR5 811 aa6.72□□□□□ -1.33
SPG11-221ENST00000560299 CARD9Q9H257 536 aa6.72□□□□□ -1.33
SPG11-221ENST00000560299 ALG13Q9NP73 1137 aaKnown RBP6.72□□□□□ -1.33
SPG11-221ENST00000560299 TLR8Q9NR97 1041 aaKnown RBP6.72□□□□□ -1.33
SPG11-221ENST00000560299 OLA1Q9NTK5 396 aaKnown RBP6.72□□□□□ -1.33
SPG11-221ENST00000560299 FAM50BQ9Y247 325 aa6.72□□□□□ -1.33
SPG11-221ENST00000560299 SLC27A5Q9Y2P5 690 aa6.72□□□□□ -1.33
SPG11-221ENST00000560299 PCDHA3Q9Y5H8 950 aa6.72□□□□□ -1.33
SPG11-221ENST00000560299 UNC80Q8N2C7 3258 aa6.71□□□□□ -1.33
SPG11-221ENST00000560299 REV3LO60673 3130 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 GOLGA6L10A0A0M3HER8 536 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 C2orf71A6NGG8 1288 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 SLC38A8A6NNN8 435 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 YJEFN3A6XGL0 299 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 E7ENQ6 273 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 ADAM12O43184 909 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 CEP104O60308 925 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 ZRANB2O95218 330 aaKnown RBP eCLIP6.71□□□□□ -1.34
SPG11-221ENST00000560299 GJB6O95452 261 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 LRG1P02750 347 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 CNPP09543 421 aaKnown RBP6.71□□□□□ -1.34
SPG11-221ENST00000560299 HOXA9P31269 272 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 RDXP35241 583 aaKnown RBP6.71□□□□□ -1.34
SPG11-221ENST00000560299 FLT3P36888 993 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 SULT1E1P49888 294 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 DNA2P51530 1060 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 AIF1P55008 147 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 COPS2P61201 443 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 YWHAGP61981 247 aaKnown RBP eCLIP6.71□□□□□ -1.34
SPG11-221ENST00000560299 ATP11AP98196 1134 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 DEUP1Q05D60 604 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 MTA1Q13330 715 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 TAF5Q15542 800 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 CDO1Q16878 200 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 ARL13BQ3SXY8 428 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 CCDC14Q49A88 953 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 PLPP4Q5VZY2 271 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 CCDC70Q6NSX1 233 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 SCYL2Q6P3W7 929 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 GPRIN1Q7Z2K8 1008 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 EMC1Q8N766 993 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 EXD1Q8NHP7 514 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 SCAMP5Q8TAC9 235 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 CLEC4CQ8WTT0 213 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 FAM172AQ8WUF8 416 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 AUTS2Q8WXX7 1259 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 CENPIQ92674 756 aaPredicted RBP6.71□□□□□ -1.34
SPG11-221ENST00000560299 HLA-CQ95604 372 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 RNF34Q969K3 372 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 RBM41Q96IZ5 413 aaKnown RBP6.71□□□□□ -1.34
SPG11-221ENST00000560299 ZNF512Q96ME7 567 aaPredicted RBP6.71□□□□□ -1.34
SPG11-221ENST00000560299 CFAP57Q96MR6 1250 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 KLHL5Q96PQ7 755 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 SLC2A13Q96QE2 648 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 TBCBQ99426 244 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 TRIM7Q9C029 511 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 GOLPH3Q9H4A6 298 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 PLEKHA4Q9H4M7 779 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 L2HGDHQ9H9P8 463 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 TMEM30AQ9NV96 361 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 DZANK1Q9NVP4 752 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 CLIC5Q9NZA1 410 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 IL37Q9NZH6 218 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 TRPM5Q9NZQ8 1165 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 PRKAG3Q9UGI9 489 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 MTUS1Q9ULD2 1270 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 USP18Q9UMW8 372 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 PACSIN2Q9UNF0 486 aaPredicted RBP6.71□□□□□ -1.34
SPG11-221ENST00000560299 MAGED2Q9UNF1 606 aaPredicted RBP6.71□□□□□ -1.34
SPG11-221ENST00000560299 MRFAP1Q9Y605 127 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 COL4A4P53420 1690 aaPredicted RBP6.71□□□□□ -1.34
SPG11-221ENST00000560299 XIRP2A4UGR9 3374 aa6.71□□□□□ -1.34
SPG11-221ENST00000560299 EYSQ5T1H1 3165 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 FAM92AA1XBS5 289 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 CTAGE15A4D2H0 777 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 M0QYT0 321 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 PGRMC1O00264 195 aaKnown RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 DDX3YO15523 660 aaKnown RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 TGM5O43548 720 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 LRCH4O75427 683 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 ENDOD1O94919 500 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 SLU7O95391 586 aaKnown RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 SEC24AO95486 1093 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 FGF19O95750 216 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 CTAGE8P0CG41 777 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 SLC2A3P11169 496 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 DNAJB1P25685 340 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 MIPP30301 263 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 CXCR5P32302 372 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 GPR15P49685 360 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 PEX5P50542 639 aa6.7□□□□□ -1.34
SPG11-221ENST00000560299 KPNA1P52294 538 aaPredicted RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 ZNF135P52742 658 aaPredicted RBP6.7□□□□□ -1.34
SPG11-221ENST00000560299 ERVFC1P60507 584 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms