RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 CEP135Q66GS9 1140 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 SV2AQ7L0J3 742 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 RGL4Q8IZJ4 473 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 C12orf29Q8N999 325 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 TRIML1Q8N9V2 468 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 CCDC150Q8NCX0 1101 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 PLEKHO2Q8TD55 490 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 UCMAQ8WVF2 138 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 WBP2Q969T9 261 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 CYFIP2Q96F07 1278 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 ZNF419Q96HQ0 510 aaPredicted RBP9.67□□□□□ -0.86
HDDC3-204ENST00000559834 CDK5RAP1Q96SZ6 601 aaKnown RBP9.67□□□□□ -0.86
HDDC3-204ENST00000559834 GABRG3Q99928 467 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 NT5C1AQ9BXI3 368 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 CYP3A43Q9HB55 503 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 CAPN10Q9HC96 672 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 PNPLA8Q9NP80 782 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 FAM49BQ9NUQ9 324 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 USP25Q9UHP3 1055 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 MSRB2Q9Y3D2 182 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 PCDHA5Q9Y5H7 936 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 ASCC3Q8N3C0 2202 aaKnown RBP9.67□□□□□ -0.86
HDDC3-204ENST00000559834 PI4KAP42356 2102 aa9.67□□□□□ -0.86
HDDC3-204ENST00000559834 KIAA1549LQ6ZVL6 1849 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 ATXN2Q99700 1313 aaKnown RBP9.66□□□□□ -0.86
HDDC3-204ENST00000559834 SPAARA0A1B0GVQ0 90 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 TRIM24O15164 1050 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 HYAL3O43820 417 aaPredicted RBP9.66□□□□□ -0.86
HDDC3-204ENST00000559834 CALUO43852 315 aaPredicted RBP9.66□□□□□ -0.86
HDDC3-204ENST00000559834 GREM1O60565 184 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 TOP3BO95985 862 aaKnown RBP9.66□□□□□ -0.86
HDDC3-204ENST00000559834 MYL1P05976 194 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 CISD3P0C7P0 127 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 RARGP13631 454 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 PIK3CAP42336 1068 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 VAMP7P51809 220 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 DLG4P78352 724 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 COG7P83436 770 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 STARD3Q14849 445 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 ZNF423Q2M1K9 1284 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 PLEKHG6Q3KR16 790 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 KMT5BQ4FZB7 885 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 C10orf120Q5SQS8 335 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 FOXD4L5Q5VV16 416 aaPredicted RBP9.66□□□□□ -0.86
HDDC3-204ENST00000559834 METTL3Q86U44 580 aaKnown RBP9.66□□□□□ -0.86
HDDC3-204ENST00000559834 MIB1Q86YT6 1006 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 ZNF276Q8N554 614 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 MINDY1Q8N5J2 469 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 FOXD4L4Q8WXT5 416 aaPredicted RBP9.66□□□□□ -0.86
HDDC3-204ENST00000559834 GATA6Q92908 595 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 CCDC47Q96A33 483 aaKnown RBP9.66□□□□□ -0.86
HDDC3-204ENST00000559834 PAGE5Q96GU1 130 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 MRGPRX1Q96LB2 322 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 HSPA12BQ96MM6 686 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 ACOX2Q99424 681 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 BACH2Q9BYV9 841 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 DCLK3Q9C098 648 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 DNAAF2Q9NVR5 837 aaKnown RBP9.66□□□□□ -0.86
HDDC3-204ENST00000559834 SERTAD1Q9UHV2 236 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 NAGPAQ9UK23 515 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 HCN2Q9UL51 889 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 CYP8B1Q9UNU6 501 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 PCDHB9Q9Y5E1 797 aa9.66□□□□□ -0.86
HDDC3-204ENST00000559834 A0A1W2PQH9 124 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 PRRT4C9JH25 899 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 MAPK13O15264 365 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 CYP26A1O43174 497 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 KLRC4O43908 158 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 SYNCRIPO60506 623 aaKnown RBP9.65□□□□□ -0.86
HDDC3-204ENST00000559834 F13A1P00488 732 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 HLA-DRAP01903 254 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 ZSCAN22P10073 491 aaPredicted RBP9.65□□□□□ -0.86
HDDC3-204ENST00000559834 KRT13P13646 458 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 NDUFV2P19404 249 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 RPL13P26373 211 aaKnown RBP9.65□□□□□ -0.86
HDDC3-204ENST00000559834 CD6P30203 668 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 ASPAP45381 313 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 PGFP49763 221 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 KIF11P52732 1056 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 INCA1Q0VD86 236 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 ORC1Q13415 861 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 FOXD4L6Q3SYB3 417 aaPredicted RBP9.65□□□□□ -0.86
HDDC3-204ENST00000559834 KIAA1211LQ6NV74 962 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 KIAA1324Q6UXG2 1013 aaKnown RBP9.65□□□□□ -0.86
HDDC3-204ENST00000559834 FOXD4L3Q6VB84 417 aaPredicted RBP9.65□□□□□ -0.86
HDDC3-204ENST00000559834 CLEC20AQ6ZU45 233 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 TOGARAM2Q6ZUX3 1019 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 INTS8Q75QN2 995 aaKnown RBP9.65□□□□□ -0.86
HDDC3-204ENST00000559834 SLC41A1Q8IVJ1 513 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 GRAMD1CQ8IYS0 662 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 ARHGAP18Q8N392 663 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 TTC39CQ8N584 583 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 KIAA0895Q8NCT3 520 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 ZCCHC14Q8WYQ9 949 aaKnown RBP9.65□□□□□ -0.86
HDDC3-204ENST00000559834 JAKMIP2Q96AA8 810 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 ELMO3Q96BJ8 720 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 TMEM121BQ9BXQ6 578 aaPredicted RBP9.65□□□□□ -0.86
HDDC3-204ENST00000559834 DUSP16Q9BY84 665 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 ZDHHC5Q9C0B5 715 aa9.65□□□□□ -0.86
HDDC3-204ENST00000559834 KCTD10Q9H3F6 313 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms