RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 ARL2BPQ9Y2Y0 163 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 MYH1P12882 1939 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 CCDC78A2IDD5 438 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 MYADML2A6NDP7 307 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 C3orf70A6NLC5 250 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 PROSCO94903 275 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 ENDOD1O94919 500 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 RTN3O95197 1032 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 LMNAP02545 664 aaKnown RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 OR4Q2P0C623 313 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 ATP4AP20648 1035 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 CCR1P32246 355 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 TWF1Q12792 350 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 DDR2Q16832 855 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 SWT1Q5T5J6 900 aaKnown RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 PLPP4Q5VZY2 271 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 LONP2Q86WA8 852 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 NPAS4Q8IUM7 802 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 TMEM192Q8IY95 271 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 FAM71AQ8IYT1 594 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 CNPY4Q8N129 248 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 MCUQ8NE86 351 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 R3HDMLQ9H3Y0 253 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 FAF1Q9UNN5 650 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 DERAQ9Y315 318 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 CDY1Q9Y6F8 540 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 ZSCAN5CA6NGD5 496 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 CKBP12277 381 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 PBX3P40426 434 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 PRAMEP78395 509 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 DUSP4Q13115 394 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 NR1H3Q13133 447 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 EPM2AIP1Q7L775 607 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 MYLK4Q86YV6 388 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 GPR152Q8TDT2 470 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 MYLPFQ96A32 169 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 CORO1BQ9BR76 489 aa11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 SUDS3Q9H7L9 328 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.04□□□□□ -0.64
CARMIL3-202ENST00000559694 EOMESO95936 686 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 PRLRP16471 622 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 PPARGP37231 505 aaPredicted RBP11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 TBX4P57082 545 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 PCSK7Q16549 785 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 CES5AQ6NT32 575 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 LLGL2Q6P1M3 1020 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 FOXR2Q6PJQ5 311 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 CCDC149Q6ZUS6 474 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 ZSWIM1Q9BR11 485 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 MAGEB5Q9BZ81 275 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 CDHR5Q9HBB8 845 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 FLRT1Q9NZU1 646 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 TNRC6CQ9HCJ0 1690 aaKnown RBP11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 FAM187AA6NFU0 413 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 DNM1LO00429 736 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 AGTP01019 485 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 PAMP19021 973 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 LILRA4P59901 499 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 SLC6A3Q01959 620 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 PDIA2Q13087 525 aaKnown RBP11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 NFIL3Q16649 462 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 PABPC1LQ4VXU2 614 aaKnown RBP11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 HSP90AA5PQ58FG0 334 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 ECHDC2Q86YB7 292 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 EFHBQ8N7U6 833 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 ANKRD52Q8NB46 1076 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 AENQ8WTP8 325 aaKnown RBP11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 DEPDC1BQ8WUY9 529 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 TUBB6Q9BUF5 446 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 CIPCQ9C0C6 399 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 CARD9Q9H257 536 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 GANQ9H2C0 597 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 TMEM161AQ9NX61 479 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 PPFIA2O75334 1257 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 FSBPO95073 299 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 MT-ND3P03897 115 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 C4BPAP04003 597 aaKnown RBP11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 GSTA1P08263 222 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 GSTA2P09210 222 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 FPGSQ05932 587 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 ZCWPW2Q504Y3 356 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 CARNMT1Q8N4J0 409 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 VPS39Q96JC1 886 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 VCPIP1Q96JH7 1222 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 HHIPL1Q96JK4 782 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 FGFR1OP2Q9NVK5 253 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 DCTN4Q9UJW0 460 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 ADAM28Q9UKQ2 775 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 MAST2Q6P0Q8 1798 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 TSPAN3O60637 253 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 HSPA9P38646 679 aaKnown RBP11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 GLUD2P49448 558 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 KLC1Q07866 573 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 DBN1Q16643 649 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 RABGAP1LQ5R372 815 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 MAP3K21Q5TCX8 1036 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 ZNF697Q5TEC3 545 aa11.03□□□□□ -0.64
CARMIL3-202ENST00000559694 DCLK2Q8N568 766 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms