RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 RIN3Q8TB24 985 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 IPO4Q8TEX9 1081 aaKnown RBP4.58□□□□□ -1.68
SNX1-205ENST00000559339 STK32AQ8WU08 396 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 SLC35F5Q8WV83 523 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 ZNF606Q8WXB4 792 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 IRGQQ8WZA9 623 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 TFAP2BQ92481 460 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 KAT5Q92993 513 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 ACDQ96AP0 544 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 FAM149B1Q96BN6 582 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 PCMTD1Q96MG8 357 aaPredicted RBP4.58□□□□□ -1.68
SNX1-205ENST00000559339 KREMEN1Q96MU8 473 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 SPAG5Q96R06 1193 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 PNKPQ96T60 521 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 HINFPQ9BQA5 517 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 BBS2Q9BXC9 721 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 KLF16Q9BXK1 252 aaPredicted RBP4.58□□□□□ -1.68
SNX1-205ENST00000559339 ULBP1Q9BZM6 244 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 DCLK3Q9C098 648 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 MIS12Q9H081 205 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 PRMT8Q9NR22 394 aaPredicted RBP4.58□□□□□ -1.68
SNX1-205ENST00000559339 SPHK2Q9NRA0 654 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 FANCLQ9NW38 375 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 WDR70Q9NW82 654 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 OSER1Q9NX31 292 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 ZSCAN32Q9NX65 697 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 MARCH2Q9P0N8 246 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 DEC1Q9P2X7 70 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 RASAL2Q9UJF2 1139 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 METRNQ9UJH8 293 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 DNAJC12Q9UKB3 198 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 NUDT5Q9UKK9 219 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 RAB23Q9ULC3 237 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 SLC8A2Q9UPR5 921 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 DAAM1Q9Y4D1 1078 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 PIEZO1Q92508 2521 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 ZNF318Q5VUA4 2279 aa4.58□□□□□ -1.68
SNX1-205ENST00000559339 CCDC163A0A0D9SF12 145 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 SLC12A8A0AV02 714 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 TYW5A2RUC4 315 aaKnown RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 SHISA7A6NL88 538 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 YJEFN3A6XGL0 299 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 CHURC1-FNTBB4DL54 471 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 E7ENQ6 273 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 PROB1E7EW31 1015 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 NEDD8-MDP1E9PL57 170 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 SCAMP3O14828 347 aaKnown RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 HOXC11O43248 304 aaPredicted RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 RNF40O75150 1001 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 STC2O76061 302 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 ALDH1A2O94788 518 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 KAT7O95251 611 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 PAPSS2O95340 614 aaPredicted RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 CAVIN2O95810 425 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 EGFP01133 1207 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 LTFP02788 710 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 HMBSP08397 361 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 CCDC172P0C7W6 258 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 TYRP14679 529 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 UCHL3P15374 230 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 CYP11B1P15538 503 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 CORO1AP31146 461 aaKnown RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 HOXA6P31267 233 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 GBP1P32455 592 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 CNR2P34972 360 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 GPD2P43304 727 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 TNFRSF4P43489 277 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 SLC11A2P49281 568 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 PGFP49763 221 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 RGS7P49802 495 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 ZNF165P49910 485 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 ZNF132P52740 706 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 DAOAP59103 153 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 YWHAZP63104 245 aaKnown RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 MRPS21P82921 87 aaKnown RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 ARID5AQ03989 594 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 UBXN1Q04323 297 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 MTA1Q13330 715 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 DRAP1Q14919 205 aaPredicted RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 KRT31Q15323 416 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 SYCP1Q15431 976 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 KLHL40Q2TBA0 621 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 SKOR2Q2VWA4 1001 aaPredicted RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 HSF5Q4G112 596 aaPredicted RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 FILIP1LQ4L180 1135 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 C2orf27AQ580R0 203 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 EFHC1Q5JVL4 640 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 KLHDC7AQ5VTJ3 777 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 CDKAL1Q5VV42 579 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 NUGGCQ68CJ6 796 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 SDE2Q6IQ49 451 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 FSTL4Q6MZW2 842 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 GJB7Q6PEY0 223 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 RHBDF2Q6PJF5 856 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 Q6ZS52 159 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 TOGARAM2Q6ZUX3 1019 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 SYT13Q7L8C5 426 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 SCD5Q86SK9 330 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 TMEM110Q86TL2 294 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 TMEM25Q86YD3 366 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms