RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ZNF75DP51815 510 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 ZBED6P86452 979 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 EFEMP1Q12805 493 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 ASIC2Q16515 512 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 C10orf120Q5SQS8 335 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 ARTNQ5T4W7 220 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 SFMBT2Q5VUG0 894 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 SPECC1LQ69YQ0 1117 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 TXNDC11Q6PKC3 985 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 MMS22LQ6ZRQ5 1243 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 MON1BQ7L1V2 547 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 TAC4Q86UU9 113 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 BBS7Q8IWZ6 715 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 TMEM35BQ8NCS4 154 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 ZNF397Q8NF99 534 aaPredicted RBP11.97□□□□□ -0.49
SNX1-204ENST00000559061 TTC8Q8TAM2 541 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 DQX1Q8TE96 717 aaKnown RBP11.97□□□□□ -0.49
SNX1-204ENST00000559061 OSCP1Q8WVF1 389 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 CPLX3Q8WVH0 158 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 E2F7Q96AV8 911 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 DDX23Q9BUQ8 820 aaKnown RBP11.97□□□□□ -0.49
SNX1-204ENST00000559061 NUP58Q9BVL2 599 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 EBF3Q9H4W6 596 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 TRPV5Q9NQA5 729 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 HEBP1Q9NRV9 189 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 ARHGAP20Q9P2F6 1191 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 RASAL2Q9UJF2 1139 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 CA14Q9ULX7 337 aa11.97□□□□□ -0.49
SNX1-204ENST00000559061 TMEM221A6NGB7 291 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 I6L893 689 aaPredicted RBP11.96□□□□□ -0.49
SNX1-204ENST00000559061 M0R296 226 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 GFRA2O00451 464 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 GRAP2O75791 330 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 IRF1P10914 325 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 CHRM1P11229 460 aaPredicted RBP11.96□□□□□ -0.49
SNX1-204ENST00000559061 ALADP13716 330 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 GSCP56915 257 aaPredicted RBP11.96□□□□□ -0.49
SNX1-204ENST00000559061 SLC6A3Q01959 620 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 MESP2Q0VG99 397 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 FZD5Q13467 585 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 TRIP4Q15650 581 aaPredicted RBP11.96□□□□□ -0.49
SNX1-204ENST00000559061 ARHGAP29Q52LW3 1261 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 RAB6CQ53S08 254 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 BTBD8Q5XKL5 378 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 BEND5Q7L4P6 421 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 SLC26A9Q7LBE3 791 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 BNIPLQ7Z465 357 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 PHLDB2Q86SQ0 1253 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 PHF13Q86YI8 300 aaPredicted RBP11.96□□□□□ -0.49
SNX1-204ENST00000559061 MIB1Q86YT6 1006 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 FMNL3Q8IVF7 1028 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 ARHGAP18Q8N392 663 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 ADAM32Q8TC27 787 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 SYN2Q92777 582 aaPredicted RBP11.96□□□□□ -0.49
SNX1-204ENST00000559061 DNASE1L2Q92874 299 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 FCRL2Q96LA5 508 aaPredicted RBP11.96□□□□□ -0.49
SNX1-204ENST00000559061 DNAJC7Q99615 494 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 C11orf70Q9BRQ4 267 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 RAB6CQ9H0N0 254 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 BRD9Q9H8M2 597 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 ARHGEF3Q9NR81 526 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 ASNSD1Q9NWL6 643 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 MARCH2Q9P0N8 246 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 WNT16Q9UBV4 365 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 DNMT3LQ9UJW3 386 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 TMEM59LQ9UK28 342 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 MTF2Q9Y483 593 aaPredicted RBP11.96□□□□□ -0.49
SNX1-204ENST00000559061 ZNF318Q5VUA4 2279 aa11.96□□□□□ -0.49
SNX1-204ENST00000559061 E2F8A0AVK6 867 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 ANTXRLA6NF34 631 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 DPYSL4O14531 572 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 ZNF263O14978 683 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 CBFA2T2O43439 604 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 MFAP3LO75121 409 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 DAB1O75553 588 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 CYP17A1P05093 508 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 HMBSP08397 361 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 RALAP11233 206 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 FLT3P36888 993 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 MLF2Q15773 248 aaPredicted RBP11.95□□□□□ -0.5
SNX1-204ENST00000559061 ASTE1Q2TB18 679 aaPredicted RBP11.95□□□□□ -0.5
SNX1-204ENST00000559061 SLC44A4Q53GD3 710 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 PPP1R15BQ5SWA1 713 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 OR6B2Q6IFH4 312 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 TRIM72Q6ZMU5 477 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 HTR3DQ70Z44 454 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 C12orf40Q86WS4 652 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 FAM217AQ8IXS0 508 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 DEFB106AQ8N104 65 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 SIX5Q8N196 739 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 KIAA1958Q8N8K9 716 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 TTC16Q8NEE8 873 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 JOSD2Q8TAC2 188 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 EZH1Q92800 747 aaPredicted RBP11.95□□□□□ -0.5
SNX1-204ENST00000559061 MYEOVQ96EZ4 313 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 SLC39A13Q96H72 371 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 ANLNQ9NQW6 1124 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 ABCC13Q9NSE7 274 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 DUS2Q9NX74 493 aaKnown RBP11.95□□□□□ -0.5
SNX1-204ENST00000559061 XPO7Q9UIA9 1087 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms