RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 MRGPRX4Q96LA9 322 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 GNRHR2Q96P88 292 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 FAM193BQ96PV7 902 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-209ENST00000558861 DMRTA2Q96SC8 542 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 CGRRF1Q99675 332 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 ACAD9Q9H845 621 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 SEC61A2Q9H9S3 476 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 BARHL2Q9NY43 387 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 FBXO40Q9UH90 709 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 PNMA2Q9UL42 364 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 PCDHA1Q9Y5I3 950 aa6.78□□□□□ -1.32
LRRC28-209ENST00000558861 ABCB11O95342 1321 aa6.77□□□□□ -1.32
LRRC28-209ENST00000558861 MGAMO43451 1857 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 ESYT2A0FGR8 921 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 PMS2P1A4D2B8 440 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 UBXN7O94888 489 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 PGK2P07205 417 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 FCER1AP12319 257 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 ALAS1P13196 640 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 SCG2P13521 617 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 DDCP20711 480 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 MCM2P49736 904 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 RPS6P62753 249 aaKnown RBP6.77□□□□□ -1.33
LRRC28-209ENST00000558861 DUSP8Q13202 625 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 MTM1Q13496 603 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 BAATQ14032 418 aaPredicted RBP6.77□□□□□ -1.33
LRRC28-209ENST00000558861 CCL14Q16627 93 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 USH1GQ495M9 461 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 MAMDC4Q6UXC1 1216 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 ZNF572Q7Z3I7 529 aaPredicted RBP6.77□□□□□ -1.33
LRRC28-209ENST00000558861 CRYGNQ8WXF5 182 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 PIBF1Q8WXW3 757 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 CYFIP2Q96F07 1278 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 TMEM176AQ96HP8 235 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 ZSCAN31Q96LW9 406 aaPredicted RBP6.77□□□□□ -1.33
LRRC28-209ENST00000558861 SAMD11Q96NU1 681 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 LLPHQ9BRT6 129 aaKnown RBP6.77□□□□□ -1.33
LRRC28-209ENST00000558861 LRFN3Q9BTN0 628 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 XYLT2Q9H1B5 865 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 ADAM7Q9H2U9 754 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 ISY1Q9ULR0 285 aaKnown RBP6.77□□□□□ -1.33
LRRC28-209ENST00000558861 RUVBL1Q9Y265 456 aaKnown RBP6.77□□□□□ -1.33
LRRC28-209ENST00000558861 TRIM17Q9Y577 477 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 NR2E3Q9Y5X4 410 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 ACTL7AQ9Y615 435 aa6.77□□□□□ -1.33
LRRC28-209ENST00000558861 DDX49Q9Y6V7 483 aaKnown RBP6.77□□□□□ -1.33
LRRC28-209ENST00000558861 PFASO15067 1338 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 hCG_1984214I3L0E3 225 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 B3GALT2O43825 422 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 DEXIO95424 95 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 SNAI1O95863 264 aaPredicted RBP6.76□□□□□ -1.33
LRRC28-209ENST00000558861 ALOX15P16050 662 aaPredicted RBP6.76□□□□□ -1.33
LRRC28-209ENST00000558861 RGS2P41220 211 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 ALDH1A3P47895 512 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 GZMKP49863 264 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 APBA1Q02410 837 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 KIF22Q14807 665 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 PKN2Q16513 984 aaKnown RBP6.76□□□□□ -1.33
LRRC28-209ENST00000558861 FBXO46Q6PJ61 603 aaPredicted RBP6.76□□□□□ -1.33
LRRC28-209ENST00000558861 TAX1BP1Q86VP1 789 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 CCDC83Q8IWF9 413 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 SAMD3Q8N6K7 520 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 ZNF713Q8N859 430 aaPredicted RBP6.76□□□□□ -1.33
LRRC28-209ENST00000558861 TRPV1Q8NER1 839 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 VRK1Q99986 396 aaPredicted RBP6.76□□□□□ -1.33
LRRC28-209ENST00000558861 TCF25Q9BQ70 676 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 SLC26A6Q9BXS9 759 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 ZMYND12Q9H0C1 365 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 ZCCHC4Q9H5U6 513 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 RIC8AQ9NPQ8 531 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 KMT5AQ9NQR1 393 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 GJB4Q9NTQ9 266 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 TMEM140Q9NV12 185 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 MAP3K20Q9NYL2 800 aaKnown RBP6.76□□□□□ -1.33
LRRC28-209ENST00000558861 NAP1L2Q9ULW6 460 aaPredicted RBP6.76□□□□□ -1.33
LRRC28-209ENST00000558861 MRPL11Q9Y3B7 192 aaKnown RBP6.76□□□□□ -1.33
LRRC28-209ENST00000558861 LAMA3Q16787 3333 aa6.76□□□□□ -1.33
LRRC28-209ENST00000558861 LAMA2P24043 3122 aaKnown RBP6.75□□□□□ -1.33
LRRC28-209ENST00000558861 LOC102724159A0A0B4J2E5 919 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 DHX16O60231 1041 aaKnown RBP6.75□□□□□ -1.33
LRRC28-209ENST00000558861 TUSC2O75896 110 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 RPLP2P05387 115 aaKnown RBP6.75□□□□□ -1.33
LRRC28-209ENST00000558861 CYBAP13498 195 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 CYP2B6P20813 491 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 HTR1BP28222 390 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 HOXD10P28358 340 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 HOXA13P31271 388 aaPredicted RBP6.75□□□□□ -1.33
LRRC28-209ENST00000558861 TLE1Q04724 770 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 TRAF1Q13077 416 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 MRPL49Q13405 166 aaKnown RBP6.75□□□□□ -1.33
LRRC28-209ENST00000558861 KCTD2Q14681 263 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 PWP2Q15269 919 aaKnown RBP6.75□□□□□ -1.33
LRRC28-209ENST00000558861 LLGL1Q15334 1064 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 SURF1Q15526 300 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 KHDC1Q4VXA5 237 aaKnown RBP6.75□□□□□ -1.33
LRRC28-209ENST00000558861 AFMIDQ63HM1 303 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 USP17L6PQ6QN14 398 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 RNF207Q6ZRF8 634 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 PDZD4Q76G19 769 aaPredicted RBP6.75□□□□□ -1.33
LRRC28-209ENST00000558861 HEATR3Q7Z4Q2 680 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms