RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 RAPGEFL1Q9UHV5 662 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 PCDHGC3Q9UN70 934 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 SIK3Q9Y2K2 1263 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 MTF2Q9Y483 593 aaPredicted RBP9.4□□□□□ -0.9
SPG11-207ENST00000558138 MIA3Q5JRA6 1907 aa9.4□□□□□ -0.9
SPG11-207ENST00000558138 COL4A3Q01955 1670 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 KIF26AQ9ULI4 1882 aaPredicted RBP9.39□□□□□ -0.91
SPG11-207ENST00000558138 SYNJ2BP-COX16A0A087WUM0 186 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 NEDD8-MDP1E9PL57 170 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 ARNTLO00327 626 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 EPHB6O15197 1021 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 TEX33O43247 280 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 LAMTOR5O43504 91 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 CYBBP04839 570 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 MMEP08473 750 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 CORO1AP31146 461 aaKnown RBP9.39□□□□□ -0.91
SPG11-207ENST00000558138 GJA4P35212 333 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 ZXDBP98169 803 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 GAD2Q05329 585 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 KDSRQ06136 332 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 PPP2R5DQ14738 602 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 DHCR24Q15392 516 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 ASIC2Q16515 512 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 KLHDC10Q6PID8 442 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 LRSAM1Q6UWE0 723 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 TOGARAM2Q6ZUX3 1019 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 ERICH1Q86X53 443 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 CCDC105Q8IYK2 499 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 DTWD2Q8NBA8 298 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 STK32AQ8WU08 396 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 CD101Q93033 1021 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 BHMTQ93088 406 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 RNF34Q969K3 372 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 PLD4Q96BZ4 506 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 OTUB2Q96DC9 234 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 P2RY13Q9BPV8 354 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 NAA15Q9BXJ9 866 aaKnown RBP9.39□□□□□ -0.91
SPG11-207ENST00000558138 LHX5Q9H2C1 402 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 HSD3B7Q9H2F3 369 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 FAM204AQ9H8W3 233 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 RTN4Q9NQC3 1192 aaKnown RBP9.39□□□□□ -0.91
SPG11-207ENST00000558138 COX16Q9P0S2 106 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 ZNF510Q9Y2H8 683 aa9.39□□□□□ -0.91
SPG11-207ENST00000558138 MUC3AQ02505 3323 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 A0A1B0GTH6 734 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 TYW5A2RUC4 315 aaKnown RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 LRRC10BA6NIK2 292 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 GOLGA8SH3BPF8 625 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 MSI1O43347 362 aaKnown RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 CBFA2T2O43439 604 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 GALR2O43603 387 aaPredicted RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 GRAP2O75791 330 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 STC2O76061 302 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 CYP17A1P05093 508 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 FERP16591 822 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 GBP1P32455 592 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 MAGEA9P43362 315 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 NSFP46459 744 aaKnown RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 PTPN5P54829 565 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 SEC13P55735 322 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 TBX4P57082 545 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 RNASE9P60153 205 aaKnown RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 PREPLQ4J6C6 727 aaPredicted RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 DCAF6Q58WW2 860 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 EFHC1Q5JVL4 640 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 DGKKQ5KSL6 1271 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 LY6G5CQ5SRR4 150 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 FAM102AQ5T9C2 384 aaPredicted RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 NAA35Q5VZE5 725 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 SMYD5Q6GMV2 418 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 TXNDC11Q6PKC3 985 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 TRIM72Q6ZMU5 477 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 NUDT18Q6ZVK8 323 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 FAM183BPQ6ZVS7 135 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 NOP9Q86U38 636 aaKnown RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 ZNF677Q86XU0 584 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 DENND1CQ8IV53 801 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 SCML4Q8N228 414 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 NAT16Q8N8M0 369 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 ZNF397Q8NF99 534 aaPredicted RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 ADAM32Q8TC27 787 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 EPS8L1Q8TE68 723 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 CPA5Q8WXQ8 436 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 ATOH1Q92858 354 aaPredicted RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 ZFRQ96KR1 1074 aaKnown RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 SERPINB11Q96P15 392 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 XPO6Q96QU8 1125 aaKnown RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 CPXM1Q96SM3 734 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 BBS2Q9BXC9 721 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 SLC4A5Q9BY07 1137 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 OSBPL6Q9BZF3 934 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 POPDC2Q9HBU9 364 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 SPHK2Q9NRA0 654 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 RBM12Q9NTZ6 932 aaKnown RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 IFNKQ9P0W0 207 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 CYTH4Q9UIA0 394 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 NAALADL1Q9UQQ1 740 aa9.38□□□□□ -0.91
SPG11-207ENST00000558138 HBS1LQ9Y450 684 aaKnown RBP9.38□□□□□ -0.91
SPG11-207ENST00000558138 KMT2EQ8IZD2 1858 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms