RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 WDR11Q9BZH6 1224 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 UBE2ZQ9H832 354 aaPredicted RBP6.97□□□□□ -1.29
RTF1-204ENST00000558117 DLL3Q9NYJ7 618 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 VSX1Q9NZR4 365 aaPredicted RBP6.97□□□□□ -1.29
RTF1-204ENST00000558117 HSFX1Q9UBD0 423 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 ZNF112Q9UJU3 913 aa6.97□□□□□ -1.29
RTF1-204ENST00000558117 A0A087X1B8 175 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 TMEM221A6NGB7 291 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 M0R296 226 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 FOSP01100 380 aaPredicted RBP6.96□□□□□ -1.3
RTF1-204ENST00000558117 FCER1AP12319 257 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 TYRP14679 529 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 MYOGP15173 224 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 KLRK1P26718 216 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 PHKA1P46020 1223 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 RBM5P52756 815 aaKnown RBP eCLIP6.96□□□□□ -1.3
RTF1-204ENST00000558117 USP14P54578 494 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 VCPP55072 806 aaKnown RBP6.96□□□□□ -1.3
RTF1-204ENST00000558117 MLC1Q15049 377 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 PROSER3Q2NL68 480 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 CCDC157Q569K6 752 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 EPHA10Q5JZY3 1008 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 CXorf57Q6NSI4 855 aaKnown RBP6.96□□□□□ -1.3
RTF1-204ENST00000558117 ZNF365Q70YC5 407 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 SUGP1Q8IWZ8 645 aaKnown RBP6.96□□□□□ -1.3
RTF1-204ENST00000558117 TCEAL8Q8IYN2 117 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 TMEM132CQ8N3T6 1108 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 CAMKK1Q8N5S9 505 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 TMIEQ8NEW7 156 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 PLBD2Q8NHP8 589 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 KLHL32Q96NJ5 620 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 SIN3AQ96ST3 1273 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 ADAM2Q99965 735 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 THUMPD2Q9BTF0 503 aaKnown RBP6.96□□□□□ -1.3
RTF1-204ENST00000558117 ALOXE3Q9BYJ1 711 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 SERHL2Q9H4I8 314 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 SLAMF7Q9NQ25 335 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 PNPOQ9NVS9 261 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 KCNE5Q9UJ90 142 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 PCDHA1Q9Y5I3 950 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 ZNF521Q96K83 1311 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 SPEGQ15772 3267 aa6.96□□□□□ -1.3
RTF1-204ENST00000558117 FRYLO94915 3013 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 MARCH11A6NNE9 402 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 H3BUI4 141 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 ARIH2O95376 493 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 AVPR1BP47901 424 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 CCT4P50991 539 aaKnown RBP6.95□□□□□ -1.3
RTF1-204ENST00000558117 CXADRP78310 365 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 TP53BP2Q13625 1128 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 PLS1Q14651 629 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 NXNQ6DKJ4 435 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 PPP1R3BQ86XI6 285 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 MYO1HQ8N1T3 1032 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 MAGEB6Q8N7X4 407 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 SLC44A5Q8NCS7 719 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 KRTAP4-5Q9BYR2 181 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 MRPL46Q9H2W6 279 aaKnown RBP6.95□□□□□ -1.3
RTF1-204ENST00000558117 ARMT1Q9H993 441 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 METTL14Q9HCE5 456 aaKnown RBP6.95□□□□□ -1.3
RTF1-204ENST00000558117 SIDT1Q9NXL6 827 aaKnown RBP6.95□□□□□ -1.3
RTF1-204ENST00000558117 GABBR1Q9UBS5 961 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 TESQ9UGI8 421 aaKnown RBP6.95□□□□□ -1.3
RTF1-204ENST00000558117 MUTYHQ9UIF7 546 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 ARAP2Q8WZ64 1704 aa6.95□□□□□ -1.3
RTF1-204ENST00000558117 FRMPD3Q5JV73 1810 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 KMT2EQ8IZD2 1858 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 AK9Q5TCS8 1911 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 UBXN7O94888 489 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 SPDEFO95238 335 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 TIMP1P01033 207 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 AHSGP02765 367 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 GNAI3P08754 354 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 KCNA5P22460 613 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 ZEB1P37275 1124 aaPredicted RBP6.94□□□□□ -1.3
RTF1-204ENST00000558117 FKBP1AP62942 108 aaKnown RBP6.94□□□□□ -1.3
RTF1-204ENST00000558117 GNAI1P63096 354 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 BLOC1S1P78537 153 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 TAP1Q03518 808 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 PPIGQ13427 754 aaKnown RBP eCLIP6.94□□□□□ -1.32e-7■□□□□ 8.5
RTF1-204ENST00000558117 CCDC174Q6PII3 467 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 COPS6Q7L5N1 327 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 C14orf80Q86SX3 495 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 DENND1CQ8IV53 801 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 VRK3Q8IV63 474 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 FMNL3Q8IVF7 1028 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 ZBTB34Q8NCN2 500 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 KLHDC4Q8TBB5 520 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 SOCS4Q8WXH5 440 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 TNPO1Q92973 898 aaKnown RBP6.94□□□□□ -1.3
RTF1-204ENST00000558117 RUNDC1Q96C34 613 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 MED15Q96RN5 788 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 UPF3BQ9BZI7 483 aaKnown RBP6.94□□□□□ -1.3
RTF1-204ENST00000558117 IMPG2Q9BZV3 1241 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 WDCPQ9H6R7 721 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 CERS4Q9HA82 394 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 GALNT9Q9HCQ5 603 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 CD209Q9NNX6 404 aa6.94□□□□□ -1.3
RTF1-204ENST00000558117 GNL3LQ9NVN8 582 aaKnown RBP6.94□□□□□ -1.3
RTF1-204ENST00000558117 MIS18AQ9NYP9 233 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms