RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 BECN1Q14457 450 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 MIB1Q86YT6 1006 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 OLIG1Q8TAK6 271 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 KCNV2Q8TDN2 545 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 GSDMAQ96QA5 445 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 ARID3AQ99856 593 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 CISHQ9NSE2 258 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 MARK1Q9P0L2 795 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 NUDT5Q9UKK9 219 aa15.4■□□□□ 0.06
SHMT2-235ENST00000557740 EML5Q05BV3 1969 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 ZBTB24O43167 697 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-235ENST00000557740 ADAM23O75077 832 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 HOXB2P14652 356 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 P2RY2P41231 377 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 PRCPP42785 496 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 MCCD1P59942 119 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-235ENST00000557740 ZNF658Q5TYW1 1059 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-235ENST00000557740 LPCAT2Q7L5N7 544 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 SCD5Q86SK9 330 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 FMR1NBQ8N0W7 255 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-235ENST00000557740 ARHGAP18Q8N392 663 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 SLC4A11Q8NBS3 891 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 RLN3Q8WXF3 142 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 SMARCE1Q969G3 411 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 TMEM176AQ96HP8 235 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 GTPBP4Q9BZE4 634 aaKnown RBP15.39■□□□□ 0.05
SHMT2-235ENST00000557740 FAM124BQ9H5Z6 455 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-235ENST00000557740 CLIC5Q9NZA1 410 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 HOOK1Q9UJC3 728 aaKnown RBP15.39■□□□□ 0.05
SHMT2-235ENST00000557740 RASAL2Q9UJF2 1139 aa15.39■□□□□ 0.05
SHMT2-235ENST00000557740 EPG5Q9HCE0 2579 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 KHNYNO15037 678 aaKnown RBP15.38■□□□□ 0.05
SHMT2-235ENST00000557740 TRIM24O15164 1050 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 STC2O76061 302 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 RAD23BP54727 409 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 YWHAEP62258 255 aaKnown RBP15.38■□□□□ 0.05
SHMT2-235ENST00000557740 FKBP3Q00688 224 aaKnown RBP15.38■□□□□ 0.05
SHMT2-235ENST00000557740 COBLL1Q53SF7 1204 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 EGFLAMQ63HQ2 1017 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 SDE2Q6IQ49 451 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 Q6ZNB5 142 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 RSRC2Q7L4I2 434 aaKnown RBP15.38■□□□□ 0.05
SHMT2-235ENST00000557740 PIGKQ92643 395 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 BHMTQ93088 406 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 CNTNAP3BQ96NU0 1288 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 CNTNAP3Q9BZ76 1288 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 USP3Q9Y6I4 520 aa15.38■□□□□ 0.05
SHMT2-235ENST00000557740 MYH10P35580 1976 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 LNP1A1A4G5 178 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 NTSR1P30989 418 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 WASP42768 502 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 DGKGP49619 791 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 NUCB2P80303 420 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 COG7P83436 770 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 LRRC63Q05C16 580 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 EFEMP1Q12805 493 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 STIM1Q13586 685 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 GOLGA7BQ2TAP0 167 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 CBWD6Q4V339 395 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 CBWD3Q5JTY5 395 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 CBWD5Q5RIA9 395 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 ARHGAP17Q68EM7 881 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 ARMCX6Q7L4S7 300 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 PIGZQ86VD9 579 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 CHPFQ8IZ52 775 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 ZNF276Q8N554 614 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 TATDN2Q93075 761 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 DCLK3Q9C098 648 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 ARMCX3Q9UH62 379 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-235ENST00000557740 STRIP2Q9ULQ0 834 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 ZNF510Q9Y2H8 683 aa15.37■□□□□ 0.05
SHMT2-235ENST00000557740 MYOFQ9NZM1 2061 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 PSMA7O14818 248 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 HMBSP08397 361 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 CD19P15391 556 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 DPP6P42658 865 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 TKTL1P51854 596 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 PMS1P54277 932 aaKnown RBP15.36■□□□□ 0.05
SHMT2-235ENST00000557740 BCAT1P54687 386 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 YWHAGP61981 247 aaKnown RBP eCLIP15.36■□□□□ 0.05
SHMT2-235ENST00000557740 CUL2Q13617 745 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 MAP7D1Q3KQU3 841 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 SGO2Q562F6 1265 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 DAB2IPQ5VWQ8 1189 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 LYSMD4Q5XG99 296 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 ANKRD40Q6AI12 368 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 ZC3H3Q8IXZ2 948 aaKnown RBP15.36■□□□□ 0.05
SHMT2-235ENST00000557740 TMEFF1Q8IYR6 380 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 ANKRD52Q8NB46 1076 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 ERCC4Q92889 916 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-235ENST00000557740 LSM14BQ9BX40 385 aaKnown RBP15.36■□□□□ 0.05
SHMT2-235ENST00000557740 UBXN6Q9BZV1 441 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 PLK2Q9NYY3 685 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 MARCH2Q9P0N8 246 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 CALCOCO1Q9P1Z2 691 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 HESX1Q9UBX0 185 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 STARD13Q9Y3M8 1113 aa15.36■□□□□ 0.05
SHMT2-235ENST00000557740 TRIM49BA6NDI0 452 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 C4orf47A7E2U8 309 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms