RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 RSAD2Q8WXG1 361 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 ATP2A3Q93084 1043 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 AZIN2Q96A70 460 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 FAM149B1Q96BN6 582 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 PLD4Q96BZ4 506 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 SERPINB11Q96P15 392 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 SLC22A12Q96S37 553 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 NELL2Q99435 816 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 C1QTNF1Q9BXJ1 281 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 HAUS4Q9H6D7 363 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 NMUR1Q9HB89 426 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 OSER1Q9NX31 292 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 MARCH2Q9P0N8 246 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 LSM7Q9UK45 103 aaKnown RBP14.32□□□□□ -0.12
SHMT2-234ENST00000557703 SH3BP1Q9Y3L3 701 aa14.32□□□□□ -0.12
SHMT2-234ENST00000557703 SSU72P8A0A1W2PR75 194 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 MAN2B1O00754 1011 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 SLC2A3P11169 496 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 NCAM1P13591 858 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 GDI1P31150 447 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 GBP1P32455 592 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 CHKAP35790 457 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 GPC5P78333 572 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 NUGGCQ68CJ6 796 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 ACAD10Q6JQN1 1059 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 OLFML1Q6UWY5 402 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 BMP8AQ7Z5Y6 402 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 CSGALNACT1Q8TDX6 532 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 TRIM11Q96F44 468 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 ZFRQ96KR1 1074 aaKnown RBP14.31□□□□□ -0.12
SHMT2-234ENST00000557703 SLC2A13Q96QE2 648 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 RPP25Q9BUL9 199 aaKnown RBP14.31□□□□□ -0.12
SHMT2-234ENST00000557703 CCL26Q9Y258 94 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 MRPS17Q9Y2R5 130 aaKnown RBP14.31□□□□□ -0.12
SHMT2-234ENST00000557703 PAXBP1Q9Y5B6 917 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 MYO16Q9Y6X6 1858 aa14.31□□□□□ -0.12
SHMT2-234ENST00000557703 AKR1B15C9JRZ8 316 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-234ENST00000557703 ARNTLO00327 626 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 NFATC1O95644 943 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 F9P00740 461 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 MYBL1P10243 752 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 CDC25BP30305 580 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 NOS2P35228 1153 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 IFNAR2P48551 515 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 HARS2P49590 506 aaKnown RBP14.3□□□□□ -0.12
SHMT2-234ENST00000557703 ZNF75DP51815 510 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 TBX2Q13207 712 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-234ENST00000557703 TRIP4Q15650 581 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-234ENST00000557703 ITPRIPL2Q3MIP1 535 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 PREPLQ4J6C6 727 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-234ENST00000557703 NAA35Q5VZE5 725 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 OR6B2Q6IFH4 312 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 TRIM67Q6ZTA4 783 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-234ENST00000557703 XYLT1Q86Y38 959 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 CPA6Q8N4T0 437 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 SLC20A1Q8WUM9 679 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 CPLX3Q8WVH0 158 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 CPA5Q8WXQ8 436 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 OSBPL6Q9BZF3 934 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 PLA2G2FQ9BZM2 168 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 SMOC2Q9H3U7 446 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 GKN1Q9NS71 199 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 DUS2Q9NX74 493 aaKnown RBP14.3□□□□□ -0.12
SHMT2-234ENST00000557703 ADAM22Q9P0K1 906 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 FBXL21Q9UKT6 434 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 STAP1Q9ULZ2 295 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 TLR6Q9Y2C9 796 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 TRIOO75962 3097 aa14.3□□□□□ -0.12
SHMT2-234ENST00000557703 HELZP42694 1942 aaKnown RBP14.29□□□□□ -0.12
SHMT2-234ENST00000557703 ANKRD62A6NC57 917 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 MFAP3LO75121 409 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 RTN2O75298 545 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 TBX18O95935 607 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 ERBB2P04626 1255 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 DESP17661 470 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 MATKP42679 507 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 PGFP49763 221 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 STARD6P59095 220 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 EFEMP1Q12805 493 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-234ENST00000557703 SLC44A4Q53GD3 710 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 TDRD12Q587J7 1177 aaKnown RBP14.29□□□□□ -0.12
SHMT2-234ENST00000557703 HGSNATQ68CP4 663 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 ZNF571Q7Z3V5 609 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-234ENST00000557703 RALGPS2Q86X27 583 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-234ENST00000557703 ADGRG2Q8IZP9 1017 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 C3orf20Q8ND61 904 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 CCDC26Q8TAB7 109 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 SLC30A5Q8TAD4 765 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 NT5C3BQ969T7 300 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 RSPRY1Q96DX4 576 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 PGAP3Q96FM1 320 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-234ENST00000557703 LRRC3BQ96PB8 259 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 DDX50Q9BQ39 737 aaKnown RBP14.29□□□□□ -0.12
SHMT2-234ENST00000557703 ISCUQ9H1K1 167 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 ABHD10Q9NUJ1 306 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 SEPT11Q9NVA2 429 aaKnown RBP14.29□□□□□ -0.12
SHMT2-234ENST00000557703 CFAP97Q9P2B7 532 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 IMPACTQ9P2X3 320 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms