RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 ERBB2P04626 1255 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 HMBSP08397 361 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 CCDC172P0C7W6 258 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 ARSAP15289 507 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 CDH5P33151 784 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 PBX1P40424 430 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 SOX9P48436 509 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 SNX16P57768 344 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 NOMO3P69849 1222 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 FMO1Q01740 532 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 RUNX3Q13761 415 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 EML3Q32P44 896 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 NAA35Q5VZE5 725 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 CWF19L1Q69YN2 538 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 FAM183BPQ6ZVS7 135 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 BMP8AQ7Z5Y6 402 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 TMEM110Q86TL2 294 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 CPA6Q8N4T0 437 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 FBXL6Q8N531 539 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 MSANTD4Q8NCY6 345 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 PIWIL1Q96J94 861 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 LRFN3Q9BTN0 628 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 TRIM62Q9BVG3 475 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 NUP58Q9BVL2 599 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 KLF16Q9BXK1 252 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 TTYH3Q9C0H2 523 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 SEPT11Q9NVA2 429 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 LSM7Q9UK45 103 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 MYO6Q9UM54 1294 aa11.08□□□□□ -0.64
HNRNPC-232ENST00000557442 NYNRINQ9P2P1 1898 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 MUC6Q6W4X9 2439 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 SLC12A8A0AV02 714 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 SPECC1L-ADORA2AF8WAN1 911 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 CAPN9O14815 690 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 NFATC1O95644 943 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 NCAM1P13591 858 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 CHRNB2P17787 502 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 CD72P21854 359 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 CTHP32929 405 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 STARD6P59095 220 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 COG7P83436 770 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 UBXN2BQ14CS0 331 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 ASIC2Q16515 512 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 FIGNQ5HY92 759 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 SFMBT2Q5VUG0 894 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 OR6B2Q6IFH4 312 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 MSANTD2Q6P1R3 559 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 TRIM72Q6ZMU5 477 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 TOGARAM2Q6ZUX3 1019 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 ERICH1Q86X53 443 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 BBS7Q8IWZ6 715 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 KIAA1958Q8N8K9 716 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 CPA5Q8WXQ8 436 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 WBP2Q969T9 261 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 MSANTD3Q96H12 275 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 FOXQ1Q9C009 403 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 LINC00597Q9H2U6 94 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 C8orf33Q9H7E9 229 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 ECT2Q9H8V3 914 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 TBC1D14Q9P2M4 693 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 SFMBT1Q9UHJ3 866 aa11.07□□□□□ -0.64
HNRNPC-232ENST00000557442 FANCMQ8IYD8 2048 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 KANSL1LA0AUZ9 987 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 OTOL1A6NHN0 477 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 MAN2B1O00754 1011 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 MSI1O43347 362 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 HSF2BPO75031 334 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 GRAP2O75791 330 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 STC2O76061 302 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 CYP1A1P04798 512 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 CYP17A1P05093 508 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 GLULP15104 373 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 VCPP55072 806 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 YWHAZP63104 245 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 C2CD6Q53TS8 623 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 EFHC1Q5JVL4 640 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 E4F1Q66K89 784 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 ASTLQ6HA08 431 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 C1orf228Q6PIY5 440 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 OLFML1Q6UWY5 402 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 ZNF852Q6ZMS4 543 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 RALGPS2Q86X27 583 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 PJA1Q8NG27 643 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 CPLX3Q8WVH0 158 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 FAM3CQ92520 227 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 PLD4Q96BZ4 506 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 OTUB2Q96DC9 234 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 C18orf8Q96DM3 657 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 IQCDQ96DY2 449 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 AGPAT1Q99943 283 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 DDX23Q9BUQ8 820 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 EDEM3Q9BZQ6 932 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 POPDC2Q9HBU9 364 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 LTB4R2Q9NPC1 389 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 NDRG2Q9UN36 371 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 NAALADL1Q9UQQ1 740 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 MRPS17Q9Y2R5 130 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 ITIH6Q6UXX5 1313 aa11.06□□□□□ -0.64
HNRNPC-232ENST00000557442 A0A1W2PQJ5 194 aa11.05□□□□□ -0.64
HNRNPC-232ENST00000557442 ADH1CP00326 375 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms