RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 EPHB6O15197 1021 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 TEX33O43247 280 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 GALR2O43603 387 aaPredicted RBP11.19□□□□□ -0.62
LINC00239-201ENST00000556973 LTFP02788 710 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 IRF1P10914 325 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 TARSP26639 723 aaKnown RBP11.19□□□□□ -0.62
LINC00239-201ENST00000556973 GJA4P35212 333 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 SOX5P35711 763 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 EFEMP1Q12805 493 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 DHCR24Q15392 516 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 DGKKQ5KSL6 1271 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 ZNF677Q86XU0 584 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 MIB1Q86YT6 1006 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 CCDC105Q8IYK2 499 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 DTWD2Q8NBA8 298 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 TMEM35BQ8NCS4 154 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 EDEM1Q92611 657 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 PPP1R13BQ96KQ4 1090 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 NOX5Q96PH1 765 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 TRIM62Q9BVG3 475 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 DCLK3Q9C098 648 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 MARCH2Q9P0N8 246 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 RASAL2Q9UJF2 1139 aa11.19□□□□□ -0.62
LINC00239-201ENST00000556973 A0A1B0GTH6 734 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 A0A1W2PQC6 194 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 E5RJQ4 531 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 GREM1O60565 184 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 STC2O76061 302 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 GFPT2O94808 682 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 CHRNB1P11230 501 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 CDH5P33151 784 aaPredicted RBP11.18□□□□□ -0.62
LINC00239-201ENST00000556973 GALK1P51570 392 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 GRSF1Q12849 480 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC00239-201ENST00000556973 PDCLQ13371 301 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 LRRC32Q14392 662 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 NR1I3Q14994 352 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 PON2Q15165 354 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 RHBDF2Q6PJF5 856 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 TXNDC11Q6PKC3 985 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 BEND5Q7L4P6 421 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 CACNA2D4Q7Z3S7 1137 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 PASD1Q8IV76 773 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 BBS7Q8IWZ6 715 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 SYNPOQ8N3V7 929 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 CLEC4CQ8WTT0 213 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 DDX1Q92499 740 aaKnown RBP11.18□□□□□ -0.62
LINC00239-201ENST00000556973 NAP1L5Q96NT1 182 aaPredicted RBP11.18□□□□□ -0.62
LINC00239-201ENST00000556973 IER2Q9BTL4 223 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 IRF2BPLQ9H1B7 796 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 SFMBT1Q9UHJ3 866 aa11.18□□□□□ -0.62
LINC00239-201ENST00000556973 HBS1LQ9Y450 684 aaKnown RBP11.18□□□□□ -0.62
LINC00239-201ENST00000556973 SLC12A8A0AV02 714 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 PAPSS1O43252 624 aaPredicted RBP11.17□□□□□ -0.62
LINC00239-201ENST00000556973 LSM8O95777 96 aaKnown RBP11.17□□□□□ -0.62
LINC00239-201ENST00000556973 ADH1CP00326 375 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 CYP17A1P05093 508 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 GLI1P08151 1106 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 HMBSP08397 361 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 CCDC172P0C7W6 258 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 NCAM1P13591 858 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 DRD1P21728 446 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 CHKAP35790 457 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 UBASH3AP57075 661 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 YWHAZP63104 245 aaKnown RBP11.17□□□□□ -0.62
LINC00239-201ENST00000556973 FANCCQ00597 558 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 GAD2Q05329 585 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 TRIP4Q15650 581 aaPredicted RBP11.17□□□□□ -0.62
LINC00239-201ENST00000556973 TMEM196Q5HYL7 178 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 EFHC1Q5JVL4 640 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 MSANTD2Q6P1R3 559 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 LRSAM1Q6UWE0 723 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 MAMSTRQ6ZN01 415 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 Q6ZNB5 142 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 NOP9Q86U38 636 aaKnown RBP11.17□□□□□ -0.62
LINC00239-201ENST00000556973 ZDHHC17Q8IUH5 632 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 FMNL3Q8IVF7 1028 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 C1orf210Q8IVY1 113 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 EPS8L1Q8TE68 723 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 CD101Q93033 1021 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 WBP2Q969T9 261 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 PLD4Q96BZ4 506 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 CHFRQ96EP1 664 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 CPXM1Q96SM3 734 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 P2RY13Q9BPV8 354 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 SPHK2Q9NRA0 654 aa11.17□□□□□ -0.62
LINC00239-201ENST00000556973 CAPN9O14815 690 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 SCAMP3O14828 347 aaKnown RBP11.16□□□□□ -0.62
LINC00239-201ENST00000556973 KLKB1P03952 638 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 FYNP06241 537 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 MMEP08473 750 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 ADH5P11766 374 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 CORO1AP31146 461 aaKnown RBP11.16□□□□□ -0.62
LINC00239-201ENST00000556973 EIF2DP41214 584 aaKnown RBP11.16□□□□□ -0.62
LINC00239-201ENST00000556973 GABRB2P47870 512 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 HARS2P49590 506 aaKnown RBP11.16□□□□□ -0.62
LINC00239-201ENST00000556973 PTPN5P54829 565 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 CDR2Q01850 454 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 SLC6A3Q01959 620 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 CCINQ13939 588 aa11.16□□□□□ -0.62
LINC00239-201ENST00000556973 FBXO43Q4G163 708 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms