RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ZNF132P52740 706 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 CDH8P55286 799 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 AMPD3Q01432 767 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 STARD3Q14849 445 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 COL28A1Q2UY09 1125 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 ZNF699Q32M78 642 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 ZNF667Q5HYK9 610 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 FUKQ8N0W3 1084 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 SPRYD3Q8NCJ5 442 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 CADM4Q8NFZ8 388 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 TOE1Q96GM8 510 aaKnown RBP12.55□□□□□ -0.4
ACTN1-221ENST00000556571 SMOQ99835 787 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 TRIM9Q9C026 710 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 GZF1Q9H116 711 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-221ENST00000556571 SLC6A17Q9H1V8 727 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 CUEDC2Q9H467 287 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 SMYD3Q9H7B4 428 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 PRDM16Q9HAZ2 1276 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 CD93Q9NPY3 652 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 CYLDQ9NQC7 956 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 ITM2CQ9NQX7 267 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 KRT82Q9NSB4 513 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 KBTBD4Q9NVX7 518 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 WSB2Q9NYS7 404 aaPredicted RBP12.55□□□□□ -0.4
ACTN1-221ENST00000556571 PCOLCE2Q9UKZ9 415 aa12.55□□□□□ -0.4
ACTN1-221ENST00000556571 SMG1Q96Q15 3661 aaKnown RBP12.55□□□□□ -0.4
ACTN1-221ENST00000556571 CEP192Q8TEP8 1941 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 FLNBO75369 2602 aaKnown RBP12.54□□□□□ -0.4
ACTN1-221ENST00000556571 WASH3PC4AMC7 463 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 NPC1O15118 1278 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 CLSTN1O94985 981 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 ZNF883P0CG24 379 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 OXTRP30559 389 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 PGFP49763 221 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 AP3M2P53677 418 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 ASIC1P78348 528 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 BIRC3Q13489 604 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 FUT11Q495W5 492 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 FAM26FQ5R3K3 315 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 FAM173BQ6P4H8 233 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 KLHDC10Q6PID8 442 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 IL27RAQ6UWB1 636 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 ACOT1Q86TX2 421 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 SLCO6A1Q86UG4 719 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 ZMIZ2Q8NF64 920 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 SETD7Q8WTS6 366 aaKnown RBP12.54□□□□□ -0.4
ACTN1-221ENST00000556571 GPR174Q9BXC1 333 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 CSNK1G1Q9HCP0 422 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 USP36Q9P275 1121 aaKnown RBP12.54□□□□□ -0.4
ACTN1-221ENST00000556571 CGNQ9P2M7 1197 aaKnown RBP12.54□□□□□ -0.4
ACTN1-221ENST00000556571 FBXO10Q9UK96 956 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 STON1Q9Y6Q2 735 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 UBE4BO95155 1302 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 ADAMTS20P59510 1910 aa12.54□□□□□ -0.4
ACTN1-221ENST00000556571 GOLGA4Q13439 2230 aaKnown RBP12.53□□□□□ -0.4
ACTN1-221ENST00000556571 CABIN1Q9Y6J0 2220 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 GCN1Q92616 2671 aaKnown RBP12.53□□□□□ -0.4
ACTN1-221ENST00000556571 EXOC3O60645 756 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 BEST1O76090 585 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 CER1O95813 267 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 NCAM1P13591 858 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 P4HA1P13674 534 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 PLA2G4AP47712 749 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 MAP3K7CLP57077 242 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 NCOA4Q13772 614 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 E2F5Q15329 346 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 E2F4Q16254 413 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 BMT2Q1RMZ1 405 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 CNNM4Q6P4Q7 775 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 TMPRSS7Q7RTY8 843 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 NELFCDQ8IXH7 590 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 C12orf56Q8IXR9 622 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 CRYBG2Q8N1P7 616 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 ZCCHC9Q8N567 271 aaKnown RBP12.53□□□□□ -0.4
ACTN1-221ENST00000556571 MDM1Q8TC05 714 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 SLC2A14Q8TDB8 520 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 UCMAQ8WVF2 138 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 USP28Q96RU2 1077 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 CDC6Q99741 560 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 MKRN2Q9H000 416 aaKnown RBP12.53□□□□□ -0.4
ACTN1-221ENST00000556571 MIR1-1HGQ9H1L0 117 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 GAREM1Q9H706 876 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 SCUBE2Q9NQ36 999 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 TM7SF3Q9NS93 570 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 THAP10Q9P2Z0 257 aaPredicted RBP12.53□□□□□ -0.4
ACTN1-221ENST00000556571 DKK4Q9UBT3 224 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 SCML2Q9UQR0 700 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 SLC27A6Q9Y2P4 619 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 RAXQ9Y2V3 346 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 PCDHGB2Q9Y5G2 931 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 KNTC1P50748 2209 aa12.53□□□□□ -0.4
ACTN1-221ENST00000556571 HELZ2Q9BYK8 2649 aaKnown RBP12.52□□□□□ -0.4
ACTN1-221ENST00000556571 METTL12A8MUP2 240 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 BCAT2O15382 392 aaPredicted RBP12.52□□□□□ -0.41
ACTN1-221ENST00000556571 SYNCRIPO60506 623 aaKnown RBP12.52□□□□□ -0.41
ACTN1-221ENST00000556571 CILPO75339 1184 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 CCDC130P13994 396 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 TRIM21P19474 475 aaKnown RBP12.52□□□□□ -0.41
ACTN1-221ENST00000556571 ACO1P21399 889 aaKnown RBP12.52□□□□□ -0.41
ACTN1-221ENST00000556571 MATKP42679 507 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms