RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ARHGEF37A1IGU5 675 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 STAG3L1P0CL83 205 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 TSHRP16473 764 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 TM4SF1P30408 202 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 CLCN3P51790 818 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 AMHR2Q16671 573 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 GSTA3Q16772 222 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 NAPEPLDQ6IQ20 393 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 DPY19L2Q6NUT2 758 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 CNDP1Q96KN2 507 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 RUVBL2Q9Y230 463 aaKnown RBP15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 TCRBV9S1A1TA0A576 114 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 MAGEB2O15479 319 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 HBP1O60381 514 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 TPST1O60507 370 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 HMGCRP04035 888 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 FAM58BPP0C7Q3 252 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 PTK2BQ14289 1009 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 ISLR2Q6UXK2 745 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 FAM131BQ86XD5 332 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 ZNF786Q8N393 782 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 ECSITQ9BQ95 431 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 PHACTR1Q9C0D0 580 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 C12orf65Q9H3J6 166 aaKnown RBP15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 IARS2Q9NSE4 1012 aaKnown RBP15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 MYH10P35580 1976 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 HSPA1AP0DMV8 641 aaKnown RBP15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 HSPA1BP0DMV9 641 aaKnown RBP15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 MICALL2Q8IY33 904 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 ULK2Q8IYT8 1036 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 CHST13Q8NET6 341 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 CERKQ8TCT0 537 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 MECRQ9BV79 373 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 CEP41Q9BYV8 373 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 AP5M1Q9H0R1 490 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 DDX18Q9NVP1 670 aaKnown RBP15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 IGKV6D-41A0A0C4DH26 115 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 UBAP2LQ14157 1087 aaKnown RBP15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 FAM193BQ96PV7 902 aaPredicted RBP15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 CYP3A43Q9HB55 503 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 ETNK2Q9NVF9 386 aa15.49■□□□□ 0.07
ARHGEF40-207ENST00000556399 UBA6A0AVT1 1052 aaPredicted RBP15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 GNL1P36915 607 aaPredicted RBP15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 LAMTOR4Q0VGL1 99 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 ATPAF2Q8N5M1 289 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 RNF148Q8N7C7 305 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 ZC3H15Q8WU90 426 aaKnown RBP15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 LRRC39Q96DD0 335 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 TSPAN17Q96FV3 270 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 TSPAN16Q9UKR8 245 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 SORCS3Q9UPU3 1222 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 MTSS1O43312 755 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 MGAT1P26572 445 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 GP5P40197 560 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 EMC10Q5UCC4 262 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 CCDC60Q8IWA6 550 aaPredicted RBP15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 APOL2Q9BQE5 337 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 PLIN4Q96Q06 1357 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 IGLV3-22A0A075B6J6 115 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 C2orf71A6NGG8 1288 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 M0QYT0 321 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 MGEA5O60502 916 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 ASMTLO95671 621 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 ACAP1Q15027 740 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 RNF220Q5VTB9 566 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 ZPBP2Q6X784 338 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 OR5B17Q8NGF7 314 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 OR6Y1Q8NGX8 325 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 ASAP3Q8TDY4 903 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 TBCBQ99426 244 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 EBF2Q9HAK2 575 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 ASTN2O75129 1339 aaPredicted RBP15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 TMEM191CA6NGB0 347 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 STMN1P16949 149 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 MPP3Q13368 585 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 FRA10AC1Q70Z53 315 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 DHDDSQ86SQ9 333 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 UNC45BQ8IWX7 931 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.48■□□□□ 0.078e-10■■■□□ 17.6
ARHGEF40-207ENST00000556399 CATSPER2Q96P56 530 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 NMUR2Q9GZQ4 415 aa15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 PAIP2BQ9ULR5 123 aaKnown RBP15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 PIN4Q9Y237 131 aaKnown RBP15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 ZC3H4Q9UPT8 1303 aaKnown RBP15.48■□□□□ 0.07
ARHGEF40-207ENST00000556399 CCDC153Q494R4 210 aa15.47■□□□□ 0.07
ARHGEF40-207ENST00000556399 POLNQ7Z5Q5 900 aa15.47■□□□□ 0.07
ARHGEF40-207ENST00000556399 GPR141Q7Z602 305 aa15.47■□□□□ 0.07
ARHGEF40-207ENST00000556399 WNK4Q96J92 1243 aa15.47■□□□□ 0.07
ARHGEF40-207ENST00000556399 NR1H4Q96RI1 486 aaPredicted RBP15.47■□□□□ 0.07
ARHGEF40-207ENST00000556399 DEFB129Q9H1M3 183 aa15.47■□□□□ 0.07
ARHGEF40-207ENST00000556399 SP110Q9HB58 689 aa15.47■□□□□ 0.07
ARHGEF40-207ENST00000556399 UPP2O95045 317 aa15.47■□□□□ 0.07
ARHGEF40-207ENST00000556399 TNFAIP8O95379 198 aa15.47■□□□□ 0.07
ARHGEF40-207ENST00000556399 PLEKHA7Q6IQ23 1121 aa15.47■□□□□ 0.07
ARHGEF40-207ENST00000556399 TATDN1Q6P1N9 297 aa15.47■□□□□ 0.07
ARHGEF40-207ENST00000556399 CES3Q6UWW8 571 aa15.47■□□□□ 0.07
ARHGEF40-207ENST00000556399 SCN4BQ8IWT1 228 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms