RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PRR20DP86480 221 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 PRR20BP86481 221 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 PRR20AP86496 221 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 PRKCQQ04759 706 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 ADIGQ0VDE8 80 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 MTF1Q14872 753 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 NOP9Q86U38 636 aaKnown RBP10.13□□□□□ -0.79
SRP54-210ENST00000556380 SIX5Q8N196 739 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 ARHGAP18Q8N392 663 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 OSCP1Q8WVF1 389 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 IRGQQ8WZA9 623 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 PBXIP1Q96AQ6 731 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 KLF16Q9BXK1 252 aaPredicted RBP10.13□□□□□ -0.79
SRP54-210ENST00000556380 LINC00597Q9H2U6 94 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 TSPY26PQ9H489 355 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 NLRC4Q9NPP4 1024 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 ARHGEF3Q9NR81 526 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 NAGPAQ9UK23 515 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 NOCTQ9UK39 431 aaKnown RBP10.13□□□□□ -0.79
SRP54-210ENST00000556380 FBXL21Q9UKT6 434 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 CA14Q9ULX7 337 aa10.13□□□□□ -0.79
SRP54-210ENST00000556380 NUP210Q8TEM1 1887 aaPredicted RBP10.13□□□□□ -0.79
SRP54-210ENST00000556380 MYH10P35580 1976 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 WDR87Q6ZQQ6 2873 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 PIK3R2O00459 728 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 PAPSS1O43252 624 aaPredicted RBP10.12□□□□□ -0.79
SRP54-210ENST00000556380 GDF9O60383 454 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 FBXO21O94952 628 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 FYNP06241 537 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 MBL2P11226 248 aaPredicted RBP10.12□□□□□ -0.79
SRP54-210ENST00000556380 LCP1P13796 627 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 GLULP15104 373 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 ARSAP15289 507 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 CHRNB2P17787 502 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 CDH5P33151 784 aaPredicted RBP10.12□□□□□ -0.79
SRP54-210ENST00000556380 ATP5C1P36542 298 aaKnown RBP10.12□□□□□ -0.79
SRP54-210ENST00000556380 CLCN5P51795 746 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 TNK2Q07912 1038 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 PDCLQ13371 301 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 PDGFRLQ15198 375 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 MLF2Q15773 248 aaPredicted RBP10.12□□□□□ -0.79
SRP54-210ENST00000556380 EML3Q32P44 896 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 FILIP1LQ4L180 1135 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 BSPRYQ5W0U4 402 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 CWF19L1Q69YN2 538 aaKnown RBP10.12□□□□□ -0.79
SRP54-210ENST00000556380 TRIM68Q6AZZ1 485 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 BRICD5Q6PL45 260 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 YAF2Q8IY57 180 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 SIX6OS1Q8N1H7 587 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 FBXL6Q8N531 539 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 NEK11Q8NG66 645 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 EPS8L1Q8TE68 723 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 CLEC4CQ8WTT0 213 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 BAP1Q92560 729 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 CHFRQ96EP1 664 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 TTYH3Q9C0H2 523 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 HEBP1Q9NRV9 189 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 THG1LQ9NWX6 298 aaKnown RBP10.12□□□□□ -0.79
SRP54-210ENST00000556380 SMPD4Q9NXE4 827 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 GTSE1Q9NYZ3 720 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 CFAP97Q9P2B7 532 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 DNMT3LQ9UJW3 386 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 NUDT5Q9UKK9 219 aa10.12□□□□□ -0.79
SRP54-210ENST00000556380 E2F8A0AVK6 867 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 E5RJQ4 531 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 GOLGA6L19H0YKK7 550 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 MDM4O15151 490 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 PI15O43692 258 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 GFPT2O94808 682 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 SERPINC1P01008 464 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 RALAP11233 206 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 KRT9P35527 623 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 STAT1P42224 750 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 ACADSBP45954 432 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 FZD5Q13467 585 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 RUNX3Q13761 415 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 C10orf120Q5SQS8 335 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 HTR3DQ70Z44 454 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 BEND5Q7L4P6 421 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 IRF2BP2Q7Z5L9 587 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 DDX42Q86XP3 938 aaKnown RBP eCLIP10.11□□□□□ -0.79
SRP54-210ENST00000556380 ZNF677Q86XU0 584 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 PASD1Q8IV76 773 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 ADGRG2Q8IZP9 1017 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 SLC20A1Q8WUM9 679 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 SHDQ96IW2 340 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 PPP1R13BQ96KQ4 1090 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 CPXM1Q96SM3 734 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 CDK5RAP1Q96SZ6 601 aaKnown RBP10.11□□□□□ -0.79
SRP54-210ENST00000556380 MIS12Q9H081 205 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 EBF3Q9H4W6 596 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 TBC1D17Q9HA65 648 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 DUS2Q9NX74 493 aaKnown RBP10.11□□□□□ -0.79
SRP54-210ENST00000556380 TJP2Q9UDY2 1190 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 MYO6Q9UM54 1294 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 MTF2Q9Y483 593 aaPredicted RBP10.11□□□□□ -0.79
SRP54-210ENST00000556380 WNT6Q9Y6F9 365 aa10.11□□□□□ -0.79
SRP54-210ENST00000556380 COL4A2P08572 1712 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 COL4A3Q01955 1670 aa10.1□□□□□ -0.79
SRP54-210ENST00000556380 KANSL1LA0AUZ9 987 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms