RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 ZBED1O96006 694 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 NUDT17P0C025 328 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 TGM2P21980 687 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 BDNFP23560 247 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 OR1G1P47890 313 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 SULT1E1P49888 294 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 NOMO1Q15155 1222 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 CA9Q16790 459 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 IZUMO3Q5VZ72 239 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 PM20D1Q6GTS8 502 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 HIBCHQ6NVY1 386 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-205ENST00000556096 C4orf50Q6ZRC1 276 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 TRMT10CQ7L0Y3 403 aaKnown RBP15.31■□□□□ 0.04
VPS33B-205ENST00000556096 GPRIN1Q7Z2K8 1008 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 ABI1Q8IZP0 508 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-205ENST00000556096 P3H4Q92791 437 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 CASD1Q96PB1 797 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 TMEM121Q9BTD3 319 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 EPB41L4BQ9H329 900 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 PRDM16Q9HAZ2 1276 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 DMAP1Q9NPF5 467 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-205ENST00000556096 ADAM21Q9UKJ8 722 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 AP4E1Q9UPM8 1137 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 CEP290O15078 2479 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 SGK1O00141 431 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 SYN3O14994 580 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 MCF2LO15068 1137 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 FYNP06241 537 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 PECAM1P16284 738 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-205ENST00000556096 ZFXP17010 805 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-205ENST00000556096 VPS41P49754 854 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 ATXN1P54253 815 aaKnown RBP15.31■□□□□ 0.04
VPS33B-205ENST00000556096 EIF3EP60228 445 aaKnown RBP15.31■□□□□ 0.04
VPS33B-205ENST00000556096 TERF2Q15554 542 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 P3H1Q32P28 736 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 OTUD1Q5VV17 481 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-205ENST00000556096 CEP128Q6ZU80 1094 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 CRIPAKQ8N1N5 446 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 PQLC3Q8N755 202 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 PLD5Q8N7P1 536 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 GLIS1Q8NBF1 620 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 PCDH19Q8TAB3 1148 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 ARL8AQ96BM9 186 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 PGAP3Q96FM1 320 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-205ENST00000556096 TMEM209Q96SK2 561 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 SLC9A7Q96T83 725 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 ADAM7Q9H2U9 754 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 AAASQ9NRG9 546 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 MTMR10Q9NXD2 777 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 CALCOCO1Q9P1Z2 691 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 RCOR3Q9P2K3 495 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-205ENST00000556096 DNAJB4Q9UDY4 337 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 FZD10Q9ULW2 581 aa15.31■□□□□ 0.04
VPS33B-205ENST00000556096 YJEFN3A6XGL0 299 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 E7ENQ6 273 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 APOL1O14791 398 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 TADA2AO75478 443 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 LTFP02788 710 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 RBP3P10745 1247 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 STIP1P31948 543 aaKnown RBP15.3■□□□□ 0.04
VPS33B-205ENST00000556096 RDXP35241 583 aaKnown RBP15.3■□□□□ 0.04
VPS33B-205ENST00000556096 AIF1P55008 147 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 TTMPQ5BVD1 217 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 CEP85LQ5SZL2 805 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 SYPL2Q5VXT5 272 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 MFSD5Q6N075 450 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 HFE2Q6ZVN8 426 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 BEND5Q7L4P6 421 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 BHLHA9Q7RTU4 235 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 RELL1Q8IUW5 271 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 RSAD2Q8WXG1 361 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 ZCWPW1Q9H0M4 648 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 SEMA4AQ9H3S1 761 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 DHX35Q9H5Z1 703 aaKnown RBP15.3■□□□□ 0.04
VPS33B-205ENST00000556096 NRDE2Q9H7Z3 1164 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 TMBIM4Q9HC24 238 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 LRFN2Q9ULH4 789 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 TPX2Q9ULW0 747 aaKnown RBP15.3■□□□□ 0.04
VPS33B-205ENST00000556096 USP3Q9Y6I4 520 aa15.3■□□□□ 0.04
VPS33B-205ENST00000556096 PDE4DIPQ5VU43 2346 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 GOLGA6CA6NDK9 693 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 GOLGA6L10A6NI86 522 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 M0QYT0 321 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 CAPN9O14815 690 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 USP17L7P0C7H9 530 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 ZSCAN5DPP0CG00 497 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 GOLGA6DP0CG33 693 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 MAGEA10P43363 369 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-205ENST00000556096 BCAR1P56945 870 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 DEUP1Q05D60 604 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 ZNF844Q08AG5 666 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 GPS1Q13098 491 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 DENND2CQ68D51 928 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 PCGF5Q86SE9 256 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 PRUNE1Q86TP1 453 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 SPATA2LQ8IUW3 424 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-205ENST00000556096 DCP1BQ8IZD4 617 aaKnown RBP15.29■□□□□ 0.04
VPS33B-205ENST00000556096 CCDC185Q8N715 623 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 EXOC4Q96A65 974 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms