RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 PGFP49763 221 aa12.12□□□□□ -0.47
LRP1-209ENST00000555941 E2F5Q15329 346 aa12.12□□□□□ -0.47
LRP1-209ENST00000555941 ZCWPW2Q504Y3 356 aa12.12□□□□□ -0.47
LRP1-209ENST00000555941 SYT12Q8IV01 421 aa12.12□□□□□ -0.47
LRP1-209ENST00000555941 PGBD3Q8N328 593 aa12.12□□□□□ -0.47
LRP1-209ENST00000555941 HMGB4Q8WW32 186 aa12.12□□□□□ -0.47
LRP1-209ENST00000555941 PIGKQ92643 395 aa12.12□□□□□ -0.47
LRP1-209ENST00000555941 CHAMP1Q96JM3 812 aa12.12□□□□□ -0.47
LRP1-209ENST00000555941 TWNKQ96RR1 684 aa12.12□□□□□ -0.47
LRP1-209ENST00000555941 BBS2Q9BXC9 721 aa12.12□□□□□ -0.47
LRP1-209ENST00000555941 APOBEC3GQ9HC16 384 aaKnown RBP12.12□□□□□ -0.47
LRP1-209ENST00000555941 DNAJC17Q9NVM6 304 aaKnown RBP12.12□□□□□ -0.47
LRP1-209ENST00000555941 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.12□□□□□ -0.47
LRP1-209ENST00000555941 ZDHHC9Q9Y397 364 aa12.12□□□□□ -0.47
LRP1-209ENST00000555941 USP3Q9Y6I4 520 aa12.12□□□□□ -0.47
LRP1-209ENST00000555941 MAP1BP46821 2468 aaKnown RBP12.11□□□□□ -0.47
LRP1-209ENST00000555941 A0A1W2PQH9 124 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 GFRA2O00451 464 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 AP5Z1O43299 807 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 ZNF217O75362 1048 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 ZNF202O95125 648 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 CEACAM1P13688 526 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 HOXB2P14652 356 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 CD58P19256 250 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 CSRP1P21291 193 aaKnown RBP12.11□□□□□ -0.47
LRP1-209ENST00000555941 SLC8A3P57103 927 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 IRX4P78413 519 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 COG7P83436 770 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 ST3GAL2Q16842 350 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 C10orf120Q5SQS8 335 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 Q6ZNB5 142 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 GPRIN1Q7Z2K8 1008 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 RABEPKQ7Z6M1 372 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 ARHGAP18Q8N392 663 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 CEP76Q8TAP6 659 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 RLN3Q8WXF3 142 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 WBP2Q969T9 261 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 NUSAP1Q9BXS6 441 aaKnown RBP12.11□□□□□ -0.47
LRP1-209ENST00000555941 GTPBP4Q9BZE4 634 aaKnown RBP12.11□□□□□ -0.47
LRP1-209ENST00000555941 DCLK3Q9C098 648 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 NMUR1Q9HB89 426 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 RMND1Q9NWS8 449 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 OSER1Q9NX31 292 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 MBD1Q9UIS9 605 aaPredicted RBP12.11□□□□□ -0.47
LRP1-209ENST00000555941 NAGPAQ9UK23 515 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
LRP1-209ENST00000555941 MAPK8IP1Q9UQF2 711 aa12.11□□□□□ -0.47
LRP1-209ENST00000555941 CEP295Q9C0D2 2601 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 TNRC6BQ9UPQ9 1833 aaKnown RBP12.1□□□□□ -0.47
LRP1-209ENST00000555941 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 A0A1W2PQF6 199 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 NEDD8-MDP1E9PL57 170 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 CDX4O14627 284 aaPredicted RBP12.1□□□□□ -0.47
LRP1-209ENST00000555941 NPC1O15118 1278 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 CETN3O15182 167 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 GABRG2P18507 467 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 CHKAP35790 457 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 DGKGP49619 791 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 NOVA1P51513 510 aaKnown RBP12.1□□□□□ -0.47
LRP1-209ENST00000555941 ZNF132P52740 706 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 TRIM61Q5EBN2 209 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 PPP1R26Q5T8A7 1209 aaPredicted RBP12.1□□□□□ -0.47
LRP1-209ENST00000555941 PEAR1Q5VY43 1037 aaPredicted RBP12.1□□□□□ -0.47
LRP1-209ENST00000555941 LYSMD4Q5XG99 296 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 PSAPL1Q6NUJ1 521 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 SLC23A3Q6PIS1 610 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 SCD5Q86SK9 330 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 TMEFF1Q8IYR6 380 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 CHPFQ8IZ52 775 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 FBXL13Q8NEE6 735 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 JAKMIP2Q96AA8 810 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 TMEM176AQ96HP8 235 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 HEXIM2Q96MH2 286 aaKnown RBP12.1□□□□□ -0.47
LRP1-209ENST00000555941 GABRG3Q99928 467 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 RAB20Q9NX57 234 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 FBXO10Q9UK96 956 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 PILRBQ9UKJ0 227 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 HCN2Q9UL51 889 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 SLC27A6Q9Y2P4 619 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 PI4KAP42356 2102 aa12.1□□□□□ -0.47
LRP1-209ENST00000555941 PATE3B3GLJ2 98 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 STC2O76061 302 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 CISD3P0C7P0 127 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 EPB41P11171 864 aaKnown RBP12.09□□□□□ -0.47
LRP1-209ENST00000555941 PTGER3P43115 390 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 MXI1P50539 228 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 RPL6Q02878 288 aaKnown RBP12.09□□□□□ -0.47
LRP1-209ENST00000555941 DUOXA1Q1HG43 343 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 COBLL1Q53SF7 1204 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 EGFLAMQ63HQ2 1017 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 ARHGAP17Q68EM7 881 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 TPGS1Q6ZTW0 290 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 IPO4Q8TEX9 1081 aaKnown RBP12.09□□□□□ -0.47
LRP1-209ENST00000555941 CISHQ9NSE2 258 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 CALCOCO1Q9P1Z2 691 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 CEP192Q8TEP8 1941 aa12.09□□□□□ -0.47
LRP1-209ENST00000555941 UPK3BL1B0FP48 263 aa12.08□□□□□ -0.48
LRP1-209ENST00000555941 PRRT4C9JH25 899 aa12.08□□□□□ -0.48
LRP1-209ENST00000555941 UPK3BL2E5RIL1 263 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms