RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 MTCL1Q9Y4B5 1905 aaKnown RBP13.02□□□□□ -0.32
SHMT2-221ENST00000555773 DPYSL4O14531 572 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 OAS1P00973 400 aaKnown RBP13.02□□□□□ -0.33
SHMT2-221ENST00000555773 GPD1P21695 349 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 KCNA5P22460 613 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 SDC4P31431 198 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 GBP1P32455 592 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 FLT3P36888 993 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.33
SHMT2-221ENST00000555773 SMAD4Q13485 552 aaKnown RBP13.02□□□□□ -0.33
SHMT2-221ENST00000555773 PIGHQ14442 188 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-221ENST00000555773 TEAD2Q15562 447 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 SLC5A9Q2M3M2 681 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 PUS10Q3MIT2 529 aaKnown RBP13.02□□□□□ -0.33
SHMT2-221ENST00000555773 CCDC14Q49A88 953 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 C10orf120Q5SQS8 335 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 GPR158Q5T848 1215 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 TXNDC8Q6A555 127 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 JOSD2Q8TAC2 188 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 UBE2Q2Q8WVN8 375 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 CENPIQ92674 756 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-221ENST00000555773 PGAP3Q96FM1 320 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-221ENST00000555773 NPY6RQ99463 290 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 CNPY3Q9BT09 278 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 SLC46A2Q9BY10 475 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 NACA2Q9H009 215 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 CCSER2Q9H7U1 834 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 ZFP37Q9Y6Q3 630 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-221ENST00000555773 PLXNA3P51805 1871 aa13.02□□□□□ -0.33
SHMT2-221ENST00000555773 TRAV19A0A0A6YYK7 116 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 C2orf78A6NCI8 922 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 GOLGA6L9A6NEM1 432 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 H3BQ06 376 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-221ENST00000555773 COCHO43405 550 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 ENDOD1O94919 500 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 GJB6O95452 261 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 OLFM2O95897 454 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 TBX18O95935 607 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 GJA1P17302 382 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 SLC7A9P82251 487 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 COG7P83436 770 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 CYP4F8P98187 520 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 NNTQ13423 1086 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 CBX2Q14781 532 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-221ENST00000555773 LEXMQ3ZCV2 418 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 ARHGAP29Q52LW3 1261 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 STRADAQ7RTN6 431 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 CMTM8Q8IZV2 173 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 EMC1Q8N766 993 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 MAB21L3Q8N8X9 362 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 MAFAQ8NHW3 353 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-221ENST00000555773 ITFG1Q8TB96 612 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 DQX1Q8TE96 717 aaKnown RBP13.01□□□□□ -0.33
SHMT2-221ENST00000555773 SERPINB11Q96P15 392 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 RNF38Q9H0F5 515 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 SMOC2Q9H3U7 446 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 TRPC7Q9HCX4 862 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 OSGEPQ9NPF4 335 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 KCND1Q9NSA2 647 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 MARCH2Q9P0N8 246 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 ANAPC7Q9UJX3 599 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 CDH7Q9ULB5 785 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 PYCARDQ9ULZ3 195 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 TFR2Q9UP52 801 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 HBS1LQ9Y450 684 aaKnown RBP13.01□□□□□ -0.33
SHMT2-221ENST00000555773 USP15Q9Y4E8 981 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-221ENST00000555773 DUSP10Q9Y6W6 482 aa13.01□□□□□ -0.33
SHMT2-221ENST00000555773 RNF8O76064 485 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 PROSCO94903 275 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 TRUB2O95900 331 aaKnown RBP13□□□□□ -0.33
SHMT2-221ENST00000555773 IGLV3-25P01717 112 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 PSMA2P25787 234 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 AVPR1AP37288 418 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 SLC1A1P43005 524 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 NAP1L1P55209 391 aaKnown RBP13□□□□□ -0.33
SHMT2-221ENST00000555773 EFEMP1Q12805 493 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 MTA1Q13330 715 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 EIF4EBP2Q13542 120 aaPredicted RBP13□□□□□ -0.33
SHMT2-221ENST00000555773 CLUL1Q15846 466 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 TRNP1Q6NT89 227 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 SND1Q7KZF4 910 aaKnown RBP eCLIP13□□□□□ -0.33
SHMT2-221ENST00000555773 BNIPLQ7Z465 357 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 NIPA2Q8N8Q9 360 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 ARL14EPQ8N8R7 260 aaPredicted RBP13□□□□□ -0.33
SHMT2-221ENST00000555773 KIAA1524Q8TCG1 905 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 FGF13Q92913 245 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 CFAP57Q96MR6 1250 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 CYP2S1Q96SQ9 504 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 SLITRK6Q9H5Y7 841 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 NUDT5Q9UKK9 219 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 GUCA1BQ9UMX6 200 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 FAM50BQ9Y247 325 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 USTQ9Y2C2 406 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 TLR6Q9Y2C9 796 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 PAXBP1Q9Y5B6 917 aa13□□□□□ -0.33
SHMT2-221ENST00000555773 GRXCR2A6NFK2 248 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 M0QYT0 321 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 MBTPS2O43462 519 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 CKMP06732 381 aa12.99□□□□□ -0.33
SHMT2-221ENST00000555773 SLC2A3P11169 496 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms