RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 RAD9BQ6WBX8 426 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 DENND4AQ7Z401 1863 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 BNIPLQ7Z465 357 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 DNAAF5Q86Y56 855 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 DEFB106AQ8N104 65 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 TDRD5Q8NAT2 981 aaKnown RBP13.26□□□□□ -0.29
SYNE2-219ENST00000555323 CCDC112Q8NEF3 446 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 RNF139Q8WU17 664 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 EDEM1Q92611 657 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 USP13Q92995 863 aaPredicted RBP13.26□□□□□ -0.29
SYNE2-219ENST00000555323 ZFRQ96KR1 1074 aaKnown RBP13.26□□□□□ -0.29
SYNE2-219ENST00000555323 PPP1R9BQ96SB3 815 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 DDX23Q9BUQ8 820 aaKnown RBP13.26□□□□□ -0.29
SYNE2-219ENST00000555323 KLF16Q9BXK1 252 aaPredicted RBP13.26□□□□□ -0.29
SYNE2-219ENST00000555323 TRPC7Q9HCX4 862 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 SPTLC3Q9NUV7 552 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 TDP1Q9NUW8 608 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 TMEM51Q9NW97 253 aa13.26□□□□□ -0.29
SYNE2-219ENST00000555323 CNOT8Q9UFF9 292 aaKnown RBP13.26□□□□□ -0.29
SYNE2-219ENST00000555323 DENND4CQ5VZ89 1909 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 ANAPC1Q9H1A4 1944 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 C2CD4BA6NLJ0 364 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 CAPN9O14815 690 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 ECI2O75521 394 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 DAB1O75553 588 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 IGLV3-25P01717 112 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 CYP1A2P05177 515 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 CKMP06732 381 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 H2AFZP0C0S5 128 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 FCARP24071 287 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 RFC1P35251 1148 aaPredicted RBP13.25□□□□□ -0.29
SYNE2-219ENST00000555323 FLT3P36888 993 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 COG7P83436 770 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 ZP2Q05996 745 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 NNTQ13423 1086 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 TCEAL1Q15170 157 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 DCAF6Q58WW2 860 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 C10orf120Q5SQS8 335 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 H2AFVQ71UI9 128 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 MTSS1LQ765P7 747 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 CELF5Q8N6W0 485 aaKnown RBP13.25□□□□□ -0.29
SYNE2-219ENST00000555323 FNIP1Q8TF40 1166 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 ELSPBP1Q96BH3 223 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 PGAP3Q96FM1 320 aaPredicted RBP13.25□□□□□ -0.29
SYNE2-219ENST00000555323 RPGRIP1Q96KN7 1286 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 NPY6RQ99463 290 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 SELENOOQ9BVL4 669 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 THAP2Q9H0W7 228 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 SMOC2Q9H3U7 446 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 SLITRK6Q9H5Y7 841 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 KIF9Q9HAQ2 790 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 ZFP14Q9HCL3 533 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 MRPL47Q9HD33 250 aaKnown RBP13.25□□□□□ -0.29
SYNE2-219ENST00000555323 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.25□□□□□ -0.29
SYNE2-219ENST00000555323 MARCH2Q9P0N8 246 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 NUDT5Q9UKK9 219 aa13.25□□□□□ -0.29
SYNE2-219ENST00000555323 DOCK8Q8NF50 2099 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 FAM170AA1A519 330 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 TMEM191CA6NGB0 347 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 GOLGA8SH3BPF8 625 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 ARHGAP6O43182 974 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 GRAP2O75791 330 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 ENDOD1O94919 500 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 TMEM253P0C7T8 217 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 MBL2P11226 248 aaPredicted RBP13.24□□□□□ -0.29
SYNE2-219ENST00000555323 ABCB4P21439 1286 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 MAGEA1P43355 309 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 KPNA1P52294 538 aaPredicted RBP13.24□□□□□ -0.29
SYNE2-219ENST00000555323 RNASE9P60153 205 aaKnown RBP13.24□□□□□ -0.29
SYNE2-219ENST00000555323 RPL7AP62424 266 aaKnown RBP13.24□□□□□ -0.29
SYNE2-219ENST00000555323 RING1Q06587 406 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 CCDC173Q0VFZ6 552 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 MTF1Q14872 753 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 SPA17Q15506 151 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 TRIP4Q15650 581 aaPredicted RBP13.24□□□□□ -0.29
SYNE2-219ENST00000555323 SLC25A52Q3SY17 297 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 TANGO2Q6ICL3 276 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 TRNP1Q6NT89 227 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 DNAJC24Q6P3W2 148 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 PARM1Q6UWI2 310 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 RSRC2Q7L4I2 434 aaKnown RBP13.24□□□□□ -0.29
SYNE2-219ENST00000555323 PHLDB2Q86SQ0 1253 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 MFSD6LQ8IWD5 586 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 JOSD2Q8TAC2 188 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 ADAMTS19Q8TE59 1207 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 DQX1Q8TE96 717 aaKnown RBP13.24□□□□□ -0.29
SYNE2-219ENST00000555323 FGF14Q92915 247 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 ZNF653Q96CK0 615 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 SLC39A13Q96H72 371 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 LRRC3BQ96PB8 259 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 PACSIN1Q9BY11 444 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 METTL5Q9NRN9 209 aaKnown RBP13.24□□□□□ -0.29
SYNE2-219ENST00000555323 IGSF9Q9P2J2 1179 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 SFMBT1Q9UHJ3 866 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 STAP1Q9ULZ2 295 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 CCL26Q9Y258 94 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 HBS1LQ9Y450 684 aaKnown RBP13.24□□□□□ -0.29
SYNE2-219ENST00000555323 PCDHA13Q9Y5I0 950 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 CPQQ9Y646 472 aa13.24□□□□□ -0.29
SYNE2-219ENST00000555323 SCINQ9Y6U3 715 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms