RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 DCAF6Q58WW2 860 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 MAP1SQ66K74 1059 aaPredicted RBP12.29□□□□□ -0.44
XRCC3-208ENST00000554811 ATG16L1Q676U5 607 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 ASRGL1Q7L266 308 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 CATSPER4Q7RTX7 472 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 PID1Q7Z2X4 250 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 DCLRE1BQ9H816 532 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 TAS2R1Q9NYW7 299 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 MAFBQ9Y5Q3 323 aaPredicted RBP12.29□□□□□ -0.44
XRCC3-208ENST00000554811 SOWAHBA6NEL2 793 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 E9PBE3 544 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 C2CD2LO14523 706 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 PMM2O15305 246 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 GSC2O15499 205 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 KLHL41O60662 606 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 CYP2F1P24903 491 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 ABL2P42684 1182 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 GLRBP48167 497 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 PPM1JQ5JR12 505 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 PPP1R26Q5T8A7 1209 aaPredicted RBP12.29□□□□□ -0.44
XRCC3-208ENST00000554811 FKBP1CQ5VVH2 108 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 XRRA1Q6P2D8 792 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 KCNT2Q6UVM3 1135 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 BANPQ8N9N5 519 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 ATP2A3Q93084 1043 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 CNPY3Q9BT09 278 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 SPATC1LQ9H0A9 340 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 ZNF358Q9NW07 568 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 DPP3Q9NY33 737 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 KLHL8Q9P2G9 620 aaPredicted RBP12.29□□□□□ -0.44
XRCC3-208ENST00000554811 CACNG4Q9UBN1 327 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 PPEF2O14830 753 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 ERVK-10P10266 1014 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 TPH1P17752 444 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 HMGB2P26583 209 aaKnown RBP12.29□□□□□ -0.44
XRCC3-208ENST00000554811 ARL4AP40617 200 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 PSEN1P49768 467 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 YWHAZP63104 245 aaKnown RBP12.29□□□□□ -0.44
XRCC3-208ENST00000554811 VGLL4Q14135 290 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 R3HDM1Q15032 1099 aaKnown RBP12.29□□□□□ -0.44
XRCC3-208ENST00000554811 METTL7BQ6UX53 244 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 IZUMO2Q6UXV1 221 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 C4orf50Q6ZRC1 276 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 CMC1Q7Z7K0 106 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 WDR83Q9BRX9 315 aaKnown RBP12.29□□□□□ -0.44
XRCC3-208ENST00000554811 SPATS2LQ9NUQ6 558 aaKnown RBP12.29□□□□□ -0.44
XRCC3-208ENST00000554811 PAK5Q9P286 719 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 MTO1Q9Y2Z2 717 aaKnown RBP12.29□□□□□ -0.44
XRCC3-208ENST00000554811 UBR3Q6ZT12 1888 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 IRF6O14896 467 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 TUBP50607 506 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 RABGAP1LQ5R372 815 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 PMF1Q6P1K2 205 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 TLDC1Q6P9B6 456 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 ADGRD1Q6QNK2 874 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 WDR75Q8IWA0 830 aaKnown RBP12.28□□□□□ -0.44
XRCC3-208ENST00000554811 SGF29Q96ES7 293 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 CPSF3Q9UKF6 684 aaKnown RBP12.28□□□□□ -0.44
XRCC3-208ENST00000554811 MAFO75444 373 aaPredicted RBP12.28□□□□□ -0.44
XRCC3-208ENST00000554811 METTL18O95568 372 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 CCNB1P14635 433 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 MGAT1P26572 445 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 SOX11P35716 441 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 VHLP40337 213 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 SURF1Q15526 300 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 FASTKD1Q53R41 847 aaKnown RBP12.28□□□□□ -0.44
XRCC3-208ENST00000554811 N4BP2L1Q5TBK1 243 aaPredicted RBP12.28□□□□□ -0.44
XRCC3-208ENST00000554811 ZPBP2Q6X784 338 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 LRRC74BQ6ZQY2 392 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 RBM15BQ8NDT2 890 aaKnown RBP12.28□□□□□ -0.44
XRCC3-208ENST00000554811 GSTCDQ8NEC7 633 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 TEKT4Q8WW24 435 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 AZIN2Q96A70 460 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 MPHOSPH6Q99547 160 aaKnown RBP12.28□□□□□ -0.44
XRCC3-208ENST00000554811 GOLGA2P5Q9HBQ8 144 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 ETNK2Q9NVF9 386 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 NDE1Q9NXR1 346 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 SNTG2Q9NY99 539 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 MAP3K20Q9NYL2 800 aaKnown RBP12.28□□□□□ -0.44
XRCC3-208ENST00000554811 SIX4Q9UIU6 781 aa12.28□□□□□ -0.44
XRCC3-208ENST00000554811 APOBEC2Q9Y235 224 aaKnown RBP12.28□□□□□ -0.44
XRCC3-208ENST00000554811 TBX10O75333 385 aa12.27□□□□□ -0.44
XRCC3-208ENST00000554811 TCEA3O75764 348 aa12.27□□□□□ -0.44
XRCC3-208ENST00000554811 C6orf222P0C671 652 aaPredicted RBP12.27□□□□□ -0.44
XRCC3-208ENST00000554811 AVPR1AP37288 418 aa12.27□□□□□ -0.44
XRCC3-208ENST00000554811 RASSF3Q86WH2 238 aa12.27□□□□□ -0.44
XRCC3-208ENST00000554811 PLD5Q8N7P1 536 aa12.27□□□□□ -0.44
XRCC3-208ENST00000554811 MAGEC3Q8TD91 643 aa12.27□□□□□ -0.44
XRCC3-208ENST00000554811 C18orf25Q96B23 403 aaPredicted RBP12.27□□□□□ -0.44
XRCC3-208ENST00000554811 RNF157Q96PX1 679 aa12.27□□□□□ -0.44
XRCC3-208ENST00000554811 WWP1Q9H0M0 922 aa12.27□□□□□ -0.44
XRCC3-208ENST00000554811 PDLIM7Q9NR12 457 aa12.27□□□□□ -0.44
XRCC3-208ENST00000554811 AK5Q9Y6K8 562 aa12.27□□□□□ -0.44
XRCC3-208ENST00000554811 ACKR2O00590 384 aa12.27□□□□□ -0.45
XRCC3-208ENST00000554811 AIM2O14862 343 aa12.27□□□□□ -0.45
XRCC3-208ENST00000554811 TM9SF1O15321 606 aa12.27□□□□□ -0.45
XRCC3-208ENST00000554811 HSPA4LO95757 839 aa12.27□□□□□ -0.45
XRCC3-208ENST00000554811 GNAT1P11488 350 aa12.27□□□□□ -0.45
XRCC3-208ENST00000554811 ITGA9Q13797 1035 aa12.27□□□□□ -0.45
XRCC3-208ENST00000554811 PPP1R2P3Q6NXS1 205 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms