RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CEP55Q53EZ4 464 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 IGSF11Q5DX21 431 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 AADACL4Q5VUY2 407 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 ARHGEF16Q5VV41 709 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 YOD1Q5VVQ6 348 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 PLPPR4Q7Z2D5 763 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 MAMDC2Q7Z304 686 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 GATAD2AQ86YP4 633 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 CCDC83Q8IWF9 413 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 ZDHHC14Q8IZN3 488 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 FIBCD1Q8N539 461 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 ANKRD53Q8N9V6 530 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 FBXO15Q8NCQ5 510 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 DBF4BQ8NFT6 615 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 DENND1AQ8TEH3 1009 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 BSNDQ8WZ55 320 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 ZNF566Q969W8 418 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 DACH2Q96NX9 599 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 ACO2Q99798 780 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 C19orf43Q9BQ61 176 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 LLPHQ9BRT6 129 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 ESYT1Q9BSJ8 1104 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 AGO4Q9HCK5 861 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 CRTAC1Q9NQ79 661 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 GLRX2Q9NS18 164 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 C1orf112Q9NSG2 853 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 HSPBP1Q9NZL4 362 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 CLEC1BQ9P126 229 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 DKK3Q9UBP4 350 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 TEKT2Q9UIF3 430 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 RPS6KA6Q9UK32 745 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 CPSF3Q9UKF6 684 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 KIAA1257Q9ULG3 409 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 STX8Q9UNK0 236 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 PLAGL2Q9UPG8 496 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 APOBEC2Q9Y235 224 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 TLR6Q9Y2C9 796 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 CARD8Q9Y2G2 431 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 TIMM22Q9Y584 194 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 PCDHGB2Q9Y5G2 931 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 SNX8Q9Y5X2 465 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 SESN1Q9Y6P5 492 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 NEDD4P46934 1319 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 TTC28Q96AY4 2481 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 COL4A2P08572 1712 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 A0A0D9SFI3 127 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 GOLGA6L19H0YKK7 550 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 PROM1O43490 865 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 RANBP6O60518 1105 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 USO1O60763 962 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 TBX10O75333 385 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 PRKD3O94806 890 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 TROVE2P10155 538 aaKnown RBP eCLIP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 C6P13671 934 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 HOXB8P17481 243 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 PSMA4P25789 261 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 TARSP26639 723 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 EVI2BP34910 448 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 TCF7P36402 384 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 HADHBP55084 474 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 COG7P83436 770 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 DNM1Q05193 864 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 MXD4Q14582 209 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 LPIN1Q14693 890 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 TLR1Q15399 786 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 STK11Q15831 433 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 SLC35G1Q2M3R5 365 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 ARL13BQ3SXY8 428 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 AARDQ4LEZ3 155 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 MDH1BQ5I0G3 518 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 FBXO47Q5MNV8 452 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 MARCH8Q5T0T0 291 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 RNF219Q5W0B1 726 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 CREB3L3Q68CJ9 461 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 HFE2Q6ZVN8 426 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 NLRC3Q7RTR2 1065 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 SPRED2Q7Z698 418 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 GPR65Q8IYL9 337 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 UBALD2Q8IYN6 164 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 CCAR2Q8N163 923 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 FBXL6Q8N531 539 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 C10orf53Q8N6V4 93 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 RDH13Q8NBN7 331 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 KCTD6Q8NC69 237 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 ZBTB34Q8NCN2 500 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 SLC30A5Q8TAD4 765 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 CEP76Q8TAP6 659 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 DEPTORQ8TB45 409 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 SPPL3Q8TCT6 385 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 LINC01599Q8WXQ3 324 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 PPP2R3CQ969Q6 453 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 FUBP3Q96I24 572 aaKnown RBP eCLIP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 MAELQ96JY0 434 aaKnown RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 PRICKLE1Q96MT3 831 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 SPATA33Q96N06 139 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 CORO1BQ9BR76 489 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 PHF7Q9BWX1 381 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-206ENST00000554429 PACSIN1Q9BY11 444 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 NCOR1P1Q9H4R4 102 aa2.85□□□□□ -1.95
PRPF39-206ENST00000554429 INTS10Q9NVR2 710 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms