RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 SCINQ9Y6U3 715 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 DUSP10Q9Y6W6 482 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 F5P12259 2224 aa15.21■□□□□ 0.03
SHMT2-208ENST00000553868 HELZ2Q9BYK8 2649 aaKnown RBP15.2■□□□□ 0.02
SHMT2-208ENST00000553868 CTAGE9A4FU28 777 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 I3L4J1 428 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 TGM5O43548 720 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 MOCS3O95396 460 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 PAPLNO95428 1278 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 SOD2P04179 222 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 PFKPQ01813 784 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 BST2Q10589 180 aaKnown RBP15.2■□□□□ 0.02
SHMT2-208ENST00000553868 PPP1R26Q5T8A7 1209 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-208ENST00000553868 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-208ENST00000553868 ZNF852Q6ZMS4 543 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 ZNF687Q8N1G0 1237 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 C12orf29Q8N999 325 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 ANKRD52Q8NB46 1076 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 ITFG1Q8TB96 612 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 SLC35G2Q8TBE7 412 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 STK32AQ8WU08 396 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 GATA6Q92908 595 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 FGF13Q92913 245 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 B3GALT6Q96L58 329 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 NELL2Q99435 816 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 C11orf70Q9BRQ4 267 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 MED10Q9BTT4 135 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 CHRDQ9H2X0 955 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 SMOC1Q9H4F8 434 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 NME7Q9Y5B8 376 aa15.2■□□□□ 0.02
SHMT2-208ENST00000553868 TIMM13Q9Y5L4 95 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-208ENST00000553868 H7C4K7 107 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 AXIN1O15169 862 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 BUB1O43683 1085 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 MTA2O94776 668 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 OAZ2O95190 189 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 ABL1P00519 1130 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 IGFBP6P24592 240 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-208ENST00000553868 ACAT1P24752 427 aaKnown RBP15.19■□□□□ 0.02
SHMT2-208ENST00000553868 GPD2P43304 727 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 PSMC1P62191 440 aaKnown RBP15.19■□□□□ 0.02
SHMT2-208ENST00000553868 MDH1BQ5I0G3 518 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 INTS6LQ5JSJ4 861 aaKnown RBP15.19■□□□□ 0.02
SHMT2-208ENST00000553868 FAM171A1Q5VUB5 890 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 HEATR6Q6AI08 1181 aaKnown RBP15.19■□□□□ 0.02
SHMT2-208ENST00000553868 FUT10Q6P4F1 479 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 ELMSAN1Q6PJG2 1045 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 MMS22LQ6ZRQ5 1243 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 DCP1BQ8IZD4 617 aaKnown RBP15.19■□□□□ 0.02
SHMT2-208ENST00000553868 SLC35F6Q8N357 371 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 C12orf50Q8NA57 414 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-208ENST00000553868 MYCBPAPQ8TBZ2 947 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 SLC2A14Q8TDB8 520 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 C18orf8Q96DM3 657 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 NAPGQ99747 312 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-208ENST00000553868 HERC2P3Q9BVR0 1158 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 IRX2Q9BZI1 471 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-208ENST00000553868 PLA2G2FQ9BZM2 168 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 ARRDC1-AS1Q9H2J1 176 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 CYLDQ9NQC7 956 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 PARVAQ9NVD7 372 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 MARCH5Q9NX47 278 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 STK39Q9UEW8 545 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 DPP7Q9UHL4 492 aa15.19■□□□□ 0.02
SHMT2-208ENST00000553868 OR6C75A6NL08 312 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 F8W810 466 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 FAM200BP0CF97 657 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 CCDC130P13994 396 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 RPL17P18621 184 aaKnown RBP15.18■□□□□ 0.02
SHMT2-208ENST00000553868 ADORA2BP29275 332 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 ACADSBP45954 432 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 PDCLQ13371 301 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 TUBB2AQ13885 445 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 PKDCCQ504Y2 493 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 ZNF280DQ6N043 979 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 DNAJC24Q6P3W2 148 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 C4orf50Q6ZRC1 276 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 MTSS1LQ765P7 747 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 DNAAF5Q86Y56 855 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 WDTC1Q8N5D0 677 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 TPCN2Q8NHX9 752 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 UBA3Q8TBC4 463 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 ARHGEF26Q96DR7 871 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 TUBB2BQ9BVA1 445 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 NUP85Q9BW27 656 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 RXFP1Q9HBX9 757 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 ZDHHC7Q9NXF8 308 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 JRKLQ9Y4A0 524 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 ZFP37Q9Y6Q3 630 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-208ENST00000553868 IGSF10Q6WRI0 2623 aa15.18■□□□□ 0.02
SHMT2-208ENST00000553868 HCRTO43612 131 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 PALMO75781 387 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 FGFR3P22607 806 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 RRM1P23921 792 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 TKTP29401 623 aaKnown RBP15.17■□□□□ 0.02
SHMT2-208ENST00000553868 GLUD2P49448 558 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 NOVA1P51513 510 aaKnown RBP15.17■□□□□ 0.02
SHMT2-208ENST00000553868 GSCP56915 257 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-208ENST00000553868 PTP4A2Q12974 167 aa15.17■□□□□ 0.02
SHMT2-208ENST00000553868 GAS6Q14393 721 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms