RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 DBX2Q6ZNG2 339 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 HS2ST1Q7LGA3 356 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 TRMT11Q7Z4G4 463 aaKnown RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 RABEPKQ7Z6M1 372 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 FAM217AQ8IXS0 508 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 SYCP3Q8IZU3 236 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 FUKQ8N0W3 1084 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 NUP93Q8N1F7 819 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 TERB1Q8NA31 727 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 RBBP8NLQ8NC74 664 aaPredicted RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 B3GALNT2Q8NCR0 500 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 TSTD1Q8NFU3 115 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 GPT2Q8TD30 523 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 PLEKHO2Q8TD55 490 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 WHAMMQ8TF30 809 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 TNIP3Q96KP6 325 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 FNBP1Q96RU3 617 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 PNKPQ96T60 521 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 GABRG3Q99928 467 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 MRPL45Q9BRJ2 306 aaKnown RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 PRR14Q9BWN1 585 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 B3GNT5Q9BYG0 378 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 UBXN6Q9BZV1 441 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 KCTD10Q9H3F6 313 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 CAPN10Q9HC96 672 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 DMAP1Q9NPF5 467 aaPredicted RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 TMEM9BQ9NQ34 198 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 CLIC5Q9NZA1 410 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 USP25Q9UHP3 1055 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 PILRBQ9UKJ0 227 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 RCOR1Q9UKL0 485 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 MAGED2Q9UNF1 606 aaPredicted RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 HPSEQ9Y251 543 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 CPQQ9Y646 472 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 USP3Q9Y6I4 520 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 THADAQ6YHU6 1953 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 PTPRQQ9UMZ3 2332 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 KNTC1P50748 2209 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 CKAP5Q14008 2032 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 A0A1W2PQD8 194 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 A0A1W2PQF6 199 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 GOLGA8IPA6NC78 632 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 GOLGA8JA6NMD2 632 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 LRRIQ3A6PVS8 624 aaPredicted RBP4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 A8MXQ7 604 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 HHLA1C9JL84 531 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 RNF223E7ERA6 249 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 SGK1O00141 431 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 KHNYNO15037 678 aaKnown RBP4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 ATXN7O15265 892 aaPredicted RBP4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 COCHO43405 550 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 HYAL3O43820 417 aaPredicted RBP4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 ZNF217O75362 1048 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 TULP3O75386 442 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 ALDH1A2O94788 518 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 DKK1O94907 266 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 VNN1O95497 513 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 PENKP01210 267 aaPredicted RBP4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 APODP05090 189 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 KRT19P08727 400 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 CISD3P0C7P0 127 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 SLFN14P0C7P3 912 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 ADH5P11766 374 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 PTMSP20962 102 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 ACO1P21399 889 aaKnown RBP4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 ANXA13P27216 316 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 GRIK1P39086 918 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 ABCG1P45844 678 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 PXNP49023 591 aaPredicted RBP4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 SLC5A3P53794 718 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 MYL6P60660 151 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 PSMC1P62191 440 aaKnown RBP4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 MESP2Q0VG99 397 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 SGSM1Q2NKQ1 1148 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 KLHL40Q2TBA0 621 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 COBLL1Q53SF7 1204 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 LY6G5CQ5SRR4 150 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 C1orf220Q5T0J3 134 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 HECTD3Q5T447 861 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 LMBRD2Q68DH5 695 aaPredicted RBP4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 HEATR6Q6AI08 1181 aaKnown RBP4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 BLOC1S3Q6QNY0 202 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 SV2AQ7L0J3 742 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 FILIP1Q7Z7B0 1213 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 GLRX5Q86SX6 157 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 FAM35AQ86V20 835 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 C12orf40Q86WS4 652 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 SYT12Q8IV01 421 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 GPIHBP1Q8IV16 184 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 SCN4BQ8IWT1 228 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 SCML4Q8N228 414 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 TTC39CQ8N584 583 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 KIAA0895Q8NCT3 520 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 STKLD1Q8NE28 680 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 TTC8Q8TAM2 541 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 CEP76Q8TAP6 659 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 HNRNPLLQ8WVV9 542 aaKnown RBP4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 DNASE2BQ8WZ79 361 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 SMARCD1Q96GM5 515 aa4.69□□□□□ -1.66
TMEM106C-220ENST00000552561 ZNF419Q96HQ0 510 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms