RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 ATF7IPQ6VMQ6 1270 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 RNF44Q7L0R7 432 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 HEATR3Q7Z4Q2 680 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 GLRX5Q86SX6 157 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 TMEM110Q86TL2 294 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 SH2D3CQ8N5H7 860 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 ARRDC4Q8NCT1 418 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 C3orf20Q8ND61 904 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 OR6Y1Q8NGX8 325 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 CSGALNACT1Q8TDX6 532 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 ATP6V0A1Q93050 837 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 TOE1Q96GM8 510 aaKnown RBP4.5□□□□□ -1.69
USP44-208ENST00000552440 TMEM209Q96SK2 561 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 USP44Q9H0E7 712 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 TMEM168Q9H0V1 697 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 MMADHCQ9H3L0 296 aaPredicted RBP4.5□□□□□ -1.69
USP44-208ENST00000552440 NOD2Q9HC29 1040 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 CACNG4Q9UBN1 327 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 SUN2Q9UH99 717 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 SIT1Q9Y3P8 196 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 CCL27Q9Y4X3 112 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 HS3ST4Q9Y661 456 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 NPEPPSL1A6NEC2 478 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 A8MVJ9 347 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CYR61O00622 381 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CSPG5O95196 566 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 PCDH8O95206 1070 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 MPIG6BO95866 241 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 F9P00740 461 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CNPP09543 421 aaKnown RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 DLDP09622 509 aaKnown RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 SNRPA1P09661 255 aaKnown RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 FAHP16930 419 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 HOXD10P28358 340 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CIITAP33076 1130 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 GRK5P34947 590 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 RFC1P35251 1148 aaPredicted RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 GP5P40197 560 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 MCAMP43121 646 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 YWHAHQ04917 246 aaPredicted RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 PPARAQ07869 468 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 DBPQ10586 325 aaPredicted RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 TBCCQ15814 346 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 ALG11Q2TAA5 492 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 PRR31Q5SQ13 230 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 DEPDC1Q5TB30 811 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 RRAGBQ5VZM2 374 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 ANKS1BQ7Z6G8 1248 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 GPR149Q86SP6 731 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 SCML4Q8N228 414 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 ANKRD35Q8N283 1001 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 AOPEPQ8N6M6 819 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CELF5Q8N6W0 485 aaKnown RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 OR52K2Q8NGK3 314 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CTCFLQ8NI51 663 aaPredicted RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 SEPT1Q8WYJ6 367 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 KTI12Q96EK9 354 aaPredicted RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 MRGPRX1Q96LB2 322 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 GBP5Q96PP8 586 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CRACR2AQ9BSW2 395 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 THUMPD3Q9BV44 507 aaKnown RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 MAGEB5Q9BZ81 275 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 NT5C3AQ9H0P0 336 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 MUC13Q9H3R2 512 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 VPS37BQ9H9H4 285 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CNNM1Q9NRU3 951 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 SNTG1Q9NSN8 517 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 PNPOQ9NVS9 261 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 HOOK1Q9UJC3 728 aaKnown RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 ANAPC5Q9UJX4 755 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 NAALADL1Q9UQQ1 740 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 MTO1Q9Y2Z2 717 aaKnown RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 PCDHA3Q9Y5H8 950 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 PCDHA13Q9Y5I0 950 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 LYVE1Q9Y5Y7 322 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 RUSC2Q8N2Y8 1516 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 PIK3R4Q99570 1358 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 RGSL1A5PLK6 1076 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 TRIM43BA6NCK2 446 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 K7EPI3 171 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 AP3B1O00203 1094 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CACNB4O00305 520 aaPredicted RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 PDHA1P08559 390 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 GZMAP12544 262 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 MXI1P50539 228 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 ARFIP1P53367 373 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 HTD2P86397 168 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 NOLC1Q14978 699 aaKnown RBP eCLIP4.49□□□□□ -1.69
USP44-208ENST00000552440 MORF4L2Q15014 288 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 ACAP1Q15027 740 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 KBTBD12Q3ZCT8 623 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CEP55Q53EZ4 464 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 GARNL3Q5VVW2 1013 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CYP20A1Q6UW02 462 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 PET117Q6UWS5 81 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 PLEKHM3Q6ZWE6 761 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 IKBIPQ70UQ0 350 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CIR1Q86X95 450 aaPredicted RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 METTL23Q86XA0 190 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms