RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 IRF6O14896 467 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 FAM189A1O60320 539 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 STAM2O75886 525 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 KRT38O76015 456 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 ASS1P00966 412 aaKnown RBP13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 ASLP04424 464 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 PYGLP06737 847 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 POLR2BP30876 1174 aaKnown RBP13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 FSTL1Q12841 308 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 STX3Q13277 289 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 MTM1Q13496 603 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 CAPSQ13938 189 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 CCNIQ14094 377 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 R3HDM1Q15032 1099 aaKnown RBP13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 NOMO1Q15155 1222 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 SH2D4BQ5SQS7 431 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 UGT2A3Q6UWM9 527 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 SAMD7Q7Z3H4 446 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 SPATA24Q86W54 205 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 TAB3Q8N5C8 712 aaPredicted RBP13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 ZNF280CQ8ND82 737 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 RTP4Q96DX8 246 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 TCHPQ9BT92 498 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 TEX13BQ9BXU2 312 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 RSAD1Q9HA92 442 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 CISHQ9NSE2 258 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 CIDEBQ9UHD4 219 aa13.24□□□□□ -0.29
CALCOCO1-217ENST00000549935 RLFQ13129 1914 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 PHIPQ8WWQ0 1821 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 DENRO43583 198 aaKnown RBP13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 OPHN1O60890 802 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 ENDOD1O94919 500 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 ATG7O95352 703 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 C6orf222P0C671 652 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 PTPRAP18433 802 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 RFC1P35251 1148 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 OAZ1P54368 228 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 YWHAZP63104 245 aaKnown RBP13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 GRM1Q13255 1194 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 PDK3Q15120 406 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 MDH1BQ5I0G3 518 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 KCNT1Q5JUK3 1230 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 WDR75Q8IWA0 830 aaKnown RBP13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 CCDC33Q8N5R6 958 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 PPM1NQ8N819 430 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 TFAP2BQ92481 460 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 RILPQ96NA2 401 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 WRNIP1Q96S55 665 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 C20orf27Q9GZN8 174 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 LHX5Q9H2C1 402 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 OCEL1Q9H607 264 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 POPDC2Q9HBU9 364 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 PICK1Q9NRD5 415 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 PAK5Q9P286 719 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 ADAMTS6Q9UKP5 1117 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 SIP14410 1827 aa13.23□□□□□ -0.29
CALCOCO1-217ENST00000549935 KRT3P12035 628 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 RANBP1P43487 201 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 SERPINB9P50453 376 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 COPAP53621 1224 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 ROR1Q01973 937 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 UBAP2LQ14157 1087 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 TMEM259Q4ZIN3 620 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 PRAMEF18Q5VWM3 479 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 BRSK2Q8IWQ3 736 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 KIAA0319LQ8IZA0 1049 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 MARVELD2Q8N4S9 558 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 SLC25A41Q8N5S1 370 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 PIWIL2Q8TC59 973 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 SPATA18Q8TC71 538 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 GDPD5Q8WTR4 605 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 NIF3L1Q9GZT8 377 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 XAB2Q9HCS7 855 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 PLK2Q9NYY3 685 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 HACL1Q9UJ83 578 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 MAD1L1Q9Y6D9 718 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 CXorf49A8MYA2 514 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 ADCY3O60266 1144 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 TMCC1O94876 653 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 ACAT1P24752 427 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 CNTFP26441 200 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 RPL5P46777 297 aaKnown RBP13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 AQP4P55087 323 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 STXBP2Q15833 593 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 MMEL1Q495T6 779 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 OGFRL1Q5TC84 451 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 ARMC3Q5W041 872 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 CYS1Q717R9 158 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 RFX6Q8HWS3 928 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 TMEM126BQ8IUX1 230 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 WDR49Q8IV35 697 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 CTAGE3PQ8IX95 158 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 MCUQ8NE86 351 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 PYDC1Q8WXC3 89 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 PRICKLE1Q96MT3 831 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 EBF4Q9BQW3 602 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 VPS33BQ9H267 617 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 NRDE2Q9H7Z3 1164 aa13.22□□□□□ -0.29
CALCOCO1-217ENST00000549935 ZNF395Q9H8N7 513 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms