RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 GRM3Q14832 879 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 PLAG1Q6DJT9 500 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 TMEM65Q6PI78 240 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 CCDC149Q6ZUS6 474 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 USP49Q70CQ1 688 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 SRGAP1Q7Z6B7 1085 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 PIM3Q86V86 326 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.01□□□□□ -1.61
CCDC38-208ENST00000549876 JDP2Q8WYK2 163 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 OGDHLQ9ULD0 1010 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 CAPN11Q9UMQ6 739 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 HS3ST3B1Q9Y662 390 aa5.01□□□□□ -1.61
CCDC38-208ENST00000549876 B4DGG1 531 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 MAP4K4O95819 1239 aaPredicted RBP5□□□□□ -1.61
CCDC38-208ENST00000549876 TPH1P17752 444 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 NTSR1P30989 418 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 KIAA0753Q2KHM9 967 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 TMEM63BQ5T3F8 832 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 DENND2CQ68D51 928 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 CYB5RLQ6IPT4 315 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 ANO7Q6IWH7 933 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 DARS2Q6PI48 645 aaKnown RBP5□□□□□ -1.61
CCDC38-208ENST00000549876 RANBP10Q6VN20 620 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 DCDC5Q6ZRR9 648 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 UNC13DQ70J99 1090 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 PELI3Q8N2H9 469 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 C12orf76Q8N812 135 aaPredicted RBP5□□□□□ -1.61
CCDC38-208ENST00000549876 C11orf44Q8N8P7 122 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 EDC3Q96F86 508 aaKnown RBP5□□□□□ -1.61
CCDC38-208ENST00000549876 MSLNLQ96KJ4 702 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 CTAGE1Q96RT6 745 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 FAM234AQ9H0X4 552 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 ZNF287Q9HBT7 754 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 NKX1-2Q9UD57 310 aaPredicted RBP5□□□□□ -1.61
CCDC38-208ENST00000549876 VPS51Q9UID3 782 aa5□□□□□ -1.61
CCDC38-208ENST00000549876 AQP7P3A6NL99 342 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 A8MVJ9 347 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 GOLIM4O00461 696 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 RPS13P62277 151 aaKnown RBP4.99□□□□□ -1.61
CCDC38-208ENST00000549876 FHL3Q13643 280 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 GALEQ14376 348 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 GBX1Q14549 363 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 KCNAB1Q14722 419 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 MANEALQ5VSG8 457 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 ANKRD13BQ86YJ7 626 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 YAF2Q8IY57 180 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 MYO1HQ8N1T3 1032 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 TRMOQ9BU70 441 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 FAM83DQ9H4H8 585 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 ZNF112Q9UJU3 913 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 ITGB1BP2Q9UKP3 347 aa4.99□□□□□ -1.61
CCDC38-208ENST00000549876 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.99□□□□□ -1.61
CCDC38-208ENST00000549876 VSTM5A8MXK1 200 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 F8W8V4 182 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 CLIC1O00299 241 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 TULP3O75386 442 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 MT-ND5P03915 603 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 CD19P15391 556 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 PEX2P28328 305 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 CARSP49589 748 aaKnown RBP4.98□□□□□ -1.61
CCDC38-208ENST00000549876 FAM193AP78312 1265 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 KCNB1Q14721 858 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 MFSD13AQ14CX5 517 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 COLCA1Q6ZS62 124 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 UBE2Q1Q7Z7E8 422 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 TSR2Q969E8 191 aaKnown RBP4.98□□□□□ -1.61
CCDC38-208ENST00000549876 ZNF668Q96K58 619 aaPredicted RBP4.98□□□□□ -1.61
CCDC38-208ENST00000549876 HIST1H2AAQ96QV6 131 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 SELENOOQ9BVL4 669 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 AS3MTQ9HBK9 375 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 ZBTB40Q9NUA8 1239 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 STEAP1Q9UHE8 339 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 G3BP2Q9UN86 482 aaKnown RBP4.98□□□□□ -1.61
CCDC38-208ENST00000549876 PROCRQ9UNN8 238 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 SLC27A6Q9Y2P4 619 aa4.98□□□□□ -1.61
CCDC38-208ENST00000549876 FRMPD2Q68DX3 1309 aaPredicted RBP4.97□□□□□ -1.61
CCDC38-208ENST00000549876 PRSS44E7EML9 344 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 TNFRSF1BP20333 461 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 HTR7P34969 479 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 COPAP53621 1224 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 GPC5P78333 572 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 SLC14A1Q13336 389 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 SEMA5AQ13591 1074 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 LVRNQ6Q4G3 990 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 VSTM1Q6UX27 236 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 CLEC9AQ6UXN8 241 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 C14orf80Q86SX3 495 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 PNPLA1Q8N8W4 532 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 MPLKIPQ8TAP9 179 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 SMCR8Q8TEV9 937 aaPredicted RBP4.97□□□□□ -1.61
CCDC38-208ENST00000549876 WIPF2Q8TF74 440 aaPredicted RBP4.97□□□□□ -1.61
CCDC38-208ENST00000549876 ZDHHC12Q96GR4 267 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 THOC3Q96J01 351 aaKnown RBP4.97□□□□□ -1.61
CCDC38-208ENST00000549876 HS6ST2Q96MM7 605 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 PPP1R10Q96QC0 940 aaKnown RBP4.97□□□□□ -1.61
CCDC38-208ENST00000549876 SEMA5BQ9P283 1151 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 DNAJB11Q9UBS4 358 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 FZD4Q9ULV1 537 aa4.97□□□□□ -1.61
CCDC38-208ENST00000549876 COL15A1P39059 1388 aa4.96□□□□□ -1.62
CCDC38-208ENST00000549876 FYB1O15117 783 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms