RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 DQX1Q8TE96 717 aaKnown RBP30.02■■■□□ 2.4
BRF1-213ENST00000548421 ZNF592Q92610 1267 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 CASP10Q92851 521 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 HES6Q96HZ4 224 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 CDK5RAP1Q96SZ6 601 aaKnown RBP30.02■■■□□ 2.4
BRF1-213ENST00000548421 TLR10Q9BXR5 811 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 ADAM33Q9BZ11 813 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 IGFLR1Q9H665 355 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 ASAH2Q9NR71 780 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 OLA1Q9NTK5 396 aaKnown RBP30.02■■■□□ 2.4
BRF1-213ENST00000548421 TADA3O75528 432 aa30.01■■■□□ 2.4
BRF1-213ENST00000548421 ENDOD1O94919 500 aa30.01■■■□□ 2.4
BRF1-213ENST00000548421 PITX1P78337 314 aaPredicted RBP30.01■■■□□ 2.4
BRF1-213ENST00000548421 RBM10P98175 930 aaKnown RBP30.01■■■□□ 2.4
BRF1-213ENST00000548421 GRIN2CQ14957 1233 aa30.01■■■□□ 2.4
BRF1-213ENST00000548421 RPS6KA1Q15418 735 aa30.01■■■□□ 2.4
BRF1-213ENST00000548421 PABPC1LQ4VXU2 614 aaKnown RBP30.01■■■□□ 2.4
BRF1-213ENST00000548421 VN1R2Q8NFZ6 395 aa30.01■■■□□ 2.4
BRF1-213ENST00000548421 PGAP3Q96FM1 320 aaPredicted RBP30.01■■■□□ 2.4
BRF1-213ENST00000548421 LRRC3Q9BY71 257 aa30.01■■■□□ 2.4
BRF1-213ENST00000548421 SMOC2Q9H3U7 446 aa30.01■■■□□ 2.4
BRF1-213ENST00000548421 FAM204AQ9H8W3 233 aa30.01■■■□□ 2.4
BRF1-213ENST00000548421 IL21Q9HBE4 155 aa30.01■■■□□ 2.4
BRF1-213ENST00000548421 DZANK1Q9NVP4 752 aa30.01■■■□□ 2.4
BRF1-213ENST00000548421 SOX1O00570 391 aaPredicted RBP30■■■□□ 2.39
BRF1-213ENST00000548421 TRUB2O95900 331 aaKnown RBP30■■■□□ 2.39
BRF1-213ENST00000548421 CTNNA1P35221 906 aaKnown RBP30■■■□□ 2.39
BRF1-213ENST00000548421 HDAC4P56524 1084 aa30■■■□□ 2.39
BRF1-213ENST00000548421 HYAL1Q12794 435 aa30■■■□□ 2.39
BRF1-213ENST00000548421 ZNF697Q5TEC3 545 aa30■■■□□ 2.39
BRF1-213ENST00000548421 MSANTD2Q6P1R3 559 aa30■■■□□ 2.39
BRF1-213ENST00000548421 TADA2BQ86TJ2 420 aa30■■■□□ 2.39
BRF1-213ENST00000548421 RHOT1Q8IXI2 618 aa30■■■□□ 2.39
BRF1-213ENST00000548421 ZNF276Q8N554 614 aa30■■■□□ 2.39
BRF1-213ENST00000548421 KIF18AQ8NI77 898 aa30■■■□□ 2.39
BRF1-213ENST00000548421 CORO1BQ9BR76 489 aa30■■■□□ 2.39
BRF1-213ENST00000548421 PRKD2Q9BZL6 878 aa30■■■□□ 2.39
BRF1-213ENST00000548421 CALCOCO1Q9P1Z2 691 aa30■■■□□ 2.39
BRF1-213ENST00000548421 CCDC66A2RUB6 948 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 PSTPIP1O43586 416 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 TLR5O60602 858 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 F11P03951 625 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 CTNNA2P26232 953 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 MIPP30301 263 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 RDXP35241 583 aaKnown RBP29.99■■■□□ 2.39
BRF1-213ENST00000548421 TUBP50607 506 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 TAS2R40P59535 323 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 DEUP1Q05D60 604 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 HADHQ16836 314 aaKnown RBP29.99■■■□□ 2.39
BRF1-213ENST00000548421 DNTTIP2Q5QJE6 756 aaKnown RBP29.99■■■□□ 2.39
BRF1-213ENST00000548421 TMEM150AQ86TG1 271 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 TAC4Q86UU9 113 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 HS6ST3Q8IZP7 471 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 UBL4BQ8N7F7 174 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 EFHBQ8N7U6 833 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 ADAM32Q8TC27 787 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 SFXN1Q9H9B4 322 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 DDIT4Q9NX09 232 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 CCDC195A0A1B0GUA6 201 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 F9P00740 461 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 IGLV3-25P01717 112 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 TCF4P15884 667 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 PTPN2P17706 415 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 GABRR2P28476 465 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 GBP1P32455 592 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 SLC25A11Q02978 314 aaKnown RBP29.99■■■□□ 2.39
BRF1-213ENST00000548421 NME3Q13232 169 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 RAB6CQ53S08 254 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 HECTD3Q5T447 861 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 RAB6CQ9H0N0 254 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 CCSER2Q9H7U1 834 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 NUDT5Q9UKK9 219 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 USP18Q9UMW8 372 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 SBDSQ9Y3A5 250 aaKnown RBP eCLIP29.99■■■□□ 2.39
BRF1-213ENST00000548421 PCDHA3Q9Y5H8 950 aa29.99■■■□□ 2.39
BRF1-213ENST00000548421 PRRC2BQ5JSZ5 2229 aaKnown RBP29.98■■■□□ 2.39
BRF1-213ENST00000548421 SYNJ2BP-COX16A0A087WUM0 186 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 PRPSAP2O60256 369 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 PAPLNO95428 1278 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 FGF19O95750 216 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 SRGAP2BP0DMP2 458 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 CDC25CP30307 473 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 EPHA5P54756 1037 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 C10orf120Q5SQS8 335 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 LRRC38Q5VT99 294 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 PAPD7Q5XG87 772 aaKnown RBP29.98■■■□□ 2.39
BRF1-213ENST00000548421 TMEM184AQ6ZMB5 413 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 LEMD2Q8NC56 503 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 KRT35Q92764 455 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 ZNF707Q96C28 371 aaPredicted RBP29.98■■■□□ 2.39
BRF1-213ENST00000548421 DOCK6Q96HP0 2047 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 SERPINB11Q96P15 392 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 GCNAQ96QF7 691 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 PIGVQ9NUD9 493 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 HCFC1R1Q9NWW0 138 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 COX16Q9P0S2 106 aa29.98■■■□□ 2.39
BRF1-213ENST00000548421 DDX3YO15523 660 aaKnown RBP29.97■■■□□ 2.39
BRF1-213ENST00000548421 DNA2P51530 1060 aa29.97■■■□□ 2.39
BRF1-213ENST00000548421 ATXN1P54253 815 aaKnown RBP29.97■■■□□ 2.39
BRF1-213ENST00000548421 SCYL2Q6P3W7 929 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms