RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CHORDC1Q9UHD1 332 aaPredicted RBP18.22■□□□□ 0.51
HDAC7-227ENST00000548080 TRIOO75962 3097 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 PIK3R2O00459 728 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 ENC1O14682 589 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 PRAMEF12O95522 483 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 FGF19O95750 216 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 ATP1A1P05023 1023 aaKnown RBP18.21■□□□□ 0.51
HDAC7-227ENST00000548080 FCARP24071 287 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 RGS7P49802 495 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 PTPN20Q4JDL3 420 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 PAPD7Q5XG87 772 aaKnown RBP18.21■□□□□ 0.51
HDAC7-227ENST00000548080 PLEKHA7Q6IQ23 1121 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 PHLDB2Q86SQ0 1253 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 ANKRD52Q8NB46 1076 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 TTC16Q8NEE8 873 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 ZNF564Q8TBZ8 553 aaPredicted RBP18.21■□□□□ 0.51
HDAC7-227ENST00000548080 MRPS31Q92665 395 aaKnown RBP18.21■□□□□ 0.51
HDAC7-227ENST00000548080 RSPRY1Q96DX4 576 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 ASB16Q96NS5 453 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 SLC22A12Q96S37 553 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 CYP2S1Q96SQ9 504 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 MRPL47Q9HD33 250 aaKnown RBP18.21■□□□□ 0.51
HDAC7-227ENST00000548080 STRIP2Q9ULQ0 834 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 SCINQ9Y6U3 715 aa18.21■□□□□ 0.51
HDAC7-227ENST00000548080 NUP210Q8TEM1 1887 aaPredicted RBP18.21■□□□□ 0.51
HDAC7-227ENST00000548080 ANHXE9PGG2 379 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 BUB1BO60566 1050 aaPredicted RBP18.2■□□□□ 0.5
HDAC7-227ENST00000548080 RTN3O95197 1032 aaPredicted RBP18.2■□□□□ 0.5
HDAC7-227ENST00000548080 BCAT1P54687 386 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 TUBB2AQ13885 445 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 GRM2Q14416 872 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 DAAM2Q86T65 1068 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 PIGZQ86VD9 579 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 C18orf8Q96DM3 657 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 TUBB2BQ9BVA1 445 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 TASP1Q9H6P5 420 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 PARVAQ9NVD7 372 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 TRPM5Q9NZQ8 1165 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 ZFP37Q9Y6Q3 630 aaPredicted RBP18.2■□□□□ 0.5
HDAC7-227ENST00000548080 FTCDO95954 541 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 GABRB2P47870 512 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 BST2Q10589 180 aaKnown RBP18.2■□□□□ 0.5
HDAC7-227ENST00000548080 PDCLQ13371 301 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 MAMLD1Q13495 774 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 MEI1Q5TIA1 1274 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 C11orf63Q6NUN7 778 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 ARID3BQ8IVW6 561 aaPredicted RBP18.2■□□□□ 0.5
HDAC7-227ENST00000548080 ARL14EPQ8N8R7 260 aaPredicted RBP18.2■□□□□ 0.5
HDAC7-227ENST00000548080 STK32AQ8WU08 396 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 NDRG1Q92597 394 aaKnown RBP18.2■□□□□ 0.5
HDAC7-227ENST00000548080 SMARCD2Q92925 531 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 CPXM1Q96SM3 734 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 MIS12Q9H081 205 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 SYNCQ9H7C4 482 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 L2HGDHQ9H9P8 463 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 WDR35Q9P2L0 1181 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 CCL26Q9Y258 94 aa18.2■□□□□ 0.5
HDAC7-227ENST00000548080 SNX16P57768 344 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 AMPD2Q01433 879 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 ZNF268Q14587 947 aaPredicted RBP18.19■□□□□ 0.5
HDAC7-227ENST00000548080 MTSS1LQ765P7 747 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 PEX26Q7Z412 305 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 SLC44A3Q8N4M1 653 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 IPO4Q8TEX9 1081 aaKnown RBP18.19■□□□□ 0.5
HDAC7-227ENST00000548080 SLC35F5Q8WV83 523 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 CEP295NLQ96MC4 621 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 SLITRK1Q96PX8 696 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 TLR10Q9BXR5 811 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 SLC4A5Q9BY07 1137 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 EPHX3Q9H6B9 360 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 AMFRQ9UKV5 643 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 SORCS3Q9UPU3 1222 aa18.19■□□□□ 0.5
HDAC7-227ENST00000548080 TCRBV5S1A1TA0A578 114 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 ZNF840PA6NDX5 716 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 XPO1O14980 1071 aaKnown RBP18.18■□□□□ 0.5
HDAC7-227ENST00000548080 DCXO43602 365 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 ERBB2P04626 1255 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 USP17L7P0C7H9 530 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 GSCP56915 257 aaPredicted RBP18.18■□□□□ 0.5
HDAC7-227ENST00000548080 TDGQ13569 410 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 MESDQ14696 234 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 DNAJC24Q6P3W2 148 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 VITQ6UXI7 678 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 MON1AQ86VX9 555 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 CMTM8Q8IZV2 173 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 C3orf20Q8ND61 904 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 LRRC3BQ96PB8 259 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 GOLPH3Q9H4A6 298 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 CCSER2Q9H7U1 834 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 ZFP14Q9HCL3 533 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 ST7Q9NRC1 585 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 IL37Q9NZH6 218 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 IGSF9Q9P2J2 1179 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 CDC23Q9UJX2 597 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 ANAPC7Q9UJX3 599 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 ALG6Q9Y672 507 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 SAR1BQ9Y6B6 198 aa18.18■□□□□ 0.5
HDAC7-227ENST00000548080 HELZP42694 1942 aaKnown RBP18.17■□□□□ 0.5
HDAC7-227ENST00000548080 A0A1W2PQH9 124 aa18.17■□□□□ 0.5
HDAC7-227ENST00000548080 TMEM110-MUSTN1A8MSY1 372 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms