RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ANKRD40Q6AI12 368 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 ANO7Q6IWH7 933 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 CLEC20AQ6ZU45 233 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 C12orf40Q86WS4 652 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 PGBD3Q8N328 593 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 KIAA1958Q8N8K9 716 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 C12orf50Q8NA57 414 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-211ENST00000547950 FBXL13Q8NEE6 735 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 OTUB2Q96DC9 234 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 LOXL4Q96JB6 756 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 ZC3H10Q96K80 434 aaKnown RBP7.07□□□□□ -1.28
SCAF11-211ENST00000547950 TSG101Q99816 390 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 RTKNQ9BST9 563 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 KLF16Q9BXK1 252 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-211ENST00000547950 TPSD1Q9BZJ3 242 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 DUSP15Q9H1R2 295 aaPredicted RBP7.07□□□□□ -1.28
SCAF11-211ENST00000547950 SMOC1Q9H4F8 434 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 SPHK2Q9NRA0 654 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 CISHQ9NSE2 258 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 OSER1Q9NX31 292 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 RAB20Q9NX57 234 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 DEC1Q9P2X7 70 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 EBF1Q9UH73 591 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 NAGPAQ9UK23 515 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 MMP17Q9ULZ9 603 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 SCML2Q9UQR0 700 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 PCDHA5Q9Y5H7 936 aa7.07□□□□□ -1.28
SCAF11-211ENST00000547950 FRYLO94915 3013 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 TSC2P49815 1807 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 TICRRQ7Z2Z1 1910 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 A0A0A0MRY4 1105 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 A0A1W2PQH9 124 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 TTC24A2A3L6 582 aaPredicted RBP7.06□□□□□ -1.28
SCAF11-211ENST00000547950 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.06□□□□□ -1.28
SCAF11-211ENST00000547950 HHLA1C9JL84 531 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 NEDD8-MDP1E9PL57 170 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 SGK1O00141 431 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 SLC30A4O14863 429 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 TRIM24O15164 1050 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 TULP3O75386 442 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 ALDH1A2O94788 518 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 RHOBTB1O94844 696 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 ZNF806P0C7X5 589 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 EIF2DP41214 584 aaKnown RBP7.06□□□□□ -1.28
SCAF11-211ENST00000547950 WASP42768 502 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 TNFRSF4P43489 277 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 PLA2G4AP47712 749 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 MXI1P50539 228 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 KIF11P52732 1056 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 RAD23BP54727 409 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 NUCB2P80303 420 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 CREB5Q02930 508 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 ENPEPQ07075 957 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 GOLGA8FQ08AF8 430 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 GOLGA8DPQ0D2H9 430 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 LRMPQ12912 555 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 CBWD6Q4V339 395 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 CBWD3Q5JTY5 395 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 CBWD5Q5RIA9 395 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 C10orf120Q5SQS8 335 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 TPGS1Q6ZTW0 290 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 HTR3DQ70Z44 454 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 MIB1Q86YT6 1006 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 IL17RCQ8NAC3 791 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 SLC4A11Q8NBS3 891 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 TXNDC5Q8NBS9 432 aaKnown RBP7.06□□□□□ -1.28
SCAF11-211ENST00000547950 NETO1Q8TDF5 533 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 RLN3Q8WXF3 142 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 BHMTQ93088 406 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 SMARCE1Q969G3 411 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 ERLEC1Q96DZ1 483 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 TMEM176AQ96HP8 235 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 GSDMAQ96QA5 445 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 ARID3AQ99856 593 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 USB1Q9BQ65 265 aaKnown RBP7.06□□□□□ -1.28
SCAF11-211ENST00000547950 BBS2Q9BXC9 721 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 DUSP16Q9BY84 665 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 NMUR1Q9HB89 426 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 CYLDQ9NQC7 956 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 RXFP3Q9NSD7 469 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 BCCIPQ9P287 314 aaKnown RBP eCLIP7.06□□□□□ -1.28
SCAF11-211ENST00000547950 HOOK1Q9UJC3 728 aaKnown RBP7.06□□□□□ -1.28
SCAF11-211ENST00000547950 DNMT3LQ9UJW3 386 aa7.06□□□□□ -1.28
SCAF11-211ENST00000547950 OTOGLQ3ZCN5 2332 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 ANK1P16157 1881 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 COL4A2P08572 1712 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 TRIM49BA6NDI0 452 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 HOXC11O43248 304 aaPredicted RBP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 FOXD2O60548 495 aaPredicted RBP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 GREM1O60565 184 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 ADAM23O75077 832 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 EPN2O95208 641 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 CAVIN2O95810 425 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 HMBSP08397 361 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 RALAP11233 206 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 HNRNPLP14866 589 aaKnown RBP eCLIP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 BCKDHBP21953 392 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 MPLP40238 635 aa7.05□□□□□ -1.28
SCAF11-211ENST00000547950 KIR2DL1P43626 348 aaPredicted RBP7.05□□□□□ -1.28
SCAF11-211ENST00000547950 PMS1P54277 932 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms