RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CEP57Q86XR8 500 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 IQCKQ8N0W5 287 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 NUP93Q8N1F7 819 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 ZMIZ2Q8NF64 920 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 OR10T2Q8NGX3 314 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 ACTL9Q8TC94 416 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 CLEC4CQ8WTT0 213 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 ATG4AQ8WYN0 398 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 FAF2Q96CS3 445 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 PIWIL1Q96J94 861 aaKnown RBP13.98□□□□□ -0.17
PTCH1-215ENST00000547672 FRMD8Q9BZ67 464 aaPredicted RBP13.98□□□□□ -0.17
PTCH1-215ENST00000547672 PLEKHA4Q9H4M7 779 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 DONSONQ9NYP3 566 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 DNAJB4Q9UDY4 337 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 FBXW11Q9UKB1 542 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 DNPEPQ9ULA0 475 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 FZD10Q9ULW2 581 aa13.98□□□□□ -0.17
PTCH1-215ENST00000547672 A6NNZ2 444 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 KIAA0355O15063 1070 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 NCAM2O15394 837 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 DGKIO75912 1065 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 STK10O94804 968 aaKnown RBP13.97□□□□□ -0.17
PTCH1-215ENST00000547672 ITGB1P05556 798 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 FAM153BP0C7A2 387 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 IGFBP6P24592 240 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-215ENST00000547672 ADRA1BP35368 520 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 SLC11A1P49279 550 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 TUFMP49411 452 aaKnown RBP13.97□□□□□ -0.17
PTCH1-215ENST00000547672 NDUFV1P49821 464 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 PMS2P54278 862 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 ROR1Q01973 937 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 SCAPQ12770 1279 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 MORF4L2Q15014 288 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 NOMO1Q15155 1222 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 LLGL1Q15334 1064 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 TUBB8Q3ZCM7 444 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 FAM153CQ494X1 144 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 PPP6R3Q5H9R7 873 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-215ENST00000547672 BRMS1LQ5PSV4 323 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 BSPRYQ5W0U4 402 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 SLC9A4Q6AI14 798 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 BNIPLQ7Z465 357 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 TMC3Q7Z5M5 1100 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 LRRTM3Q86VH5 581 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 CDKL3Q8IVW4 592 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-215ENST00000547672 GSPT2Q8IYD1 628 aaKnown RBP13.97□□□□□ -0.17
PTCH1-215ENST00000547672 GPR65Q8IYL9 337 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 SLC7A14Q8TBB6 771 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 RNF139Q8WU17 664 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 SPATA17Q96L03 361 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 PEBP4Q96S96 227 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 CCDC77Q9BR77 488 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 BRD8Q9H0E9 1235 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 PABPC3Q9H361 631 aaKnown RBP13.97□□□□□ -0.17
PTCH1-215ENST00000547672 WDCPQ9H6R7 721 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 FAM204AQ9H8W3 233 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 AAASQ9NRG9 546 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 OLA1Q9NTK5 396 aaKnown RBP13.97□□□□□ -0.17
PTCH1-215ENST00000547672 GRHL1Q9NZI5 618 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 HSFX1Q9UBD0 423 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 FAM153AQ9UHL3 310 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 TPX2Q9ULW0 747 aaKnown RBP13.97□□□□□ -0.17
PTCH1-215ENST00000547672 MAFFQ9ULX9 164 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 SCML2Q9UQR0 700 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 NEU2Q9Y3R4 380 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 BACE2Q9Y5Z0 518 aa13.97□□□□□ -0.17
PTCH1-215ENST00000547672 PCNTO95613 3336 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 TANC1Q9C0D5 1861 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 SPDYE4A6NLX3 237 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 YJEFN3A6XGL0 299 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 E7ENQ6 273 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 H7C0C1 242 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 RBP3P10745 1247 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 HSPA8P11142 646 aaKnown RBP13.96□□□□□ -0.17
PTCH1-215ENST00000547672 RAG1P15918 1043 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 KLRC2P26717 231 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 ECHS1P30084 290 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 ATP5OP48047 213 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 YWHAGP61981 247 aaKnown RBP eCLIP13.96□□□□□ -0.17
PTCH1-215ENST00000547672 DYNLT1P63172 113 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 KIAA1841Q6NSI8 718 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 PPP1R21Q6ZMI0 780 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 CYP4V2Q6ZWL3 525 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-215ENST00000547672 HOOK3Q86VS8 718 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 SCN4BQ8IWT1 228 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 PLD5Q8N7P1 536 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 FBXO25Q8TCJ0 367 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 UBLCP1Q8WVY7 318 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-215ENST00000547672 RNF34Q969K3 372 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 TOP1MTQ969P6 601 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 ACSF2Q96CM8 615 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-215ENST00000547672 GDAP1L1Q96MZ0 367 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 CDK5RAP1Q96SZ6 601 aaKnown RBP13.96□□□□□ -0.17
PTCH1-215ENST00000547672 HERPUD2Q9BSE4 406 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 PHACTR1Q9C0D0 580 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 STMN4Q9H169 189 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-215ENST00000547672 DDIT4Q9NX09 232 aa13.96□□□□□ -0.17
PTCH1-215ENST00000547672 ABI2Q9NYB9 513 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-215ENST00000547672 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.96□□□□□ -0.17
PTCH1-215ENST00000547672 SLC12A6Q9UHW9 1150 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms