RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 KCNK13Q9HB14 408 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 VTA1Q9NP79 307 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 EIF2B3Q9NR50 452 aaKnown RBP15.16■□□□□ 0.02
LETMD1-209ENST00000547318 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.16■□□□□ 0.02
LETMD1-209ENST00000547318 SIRPGQ9P1W8 387 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 DCTN4Q9UJW0 460 aa15.16■□□□□ 0.02
LETMD1-209ENST00000547318 A0A087WZ62 844 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 WDR91A4D1P6 747 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 SLC15A5A6NIM6 579 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 A6NJR5 290 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 GOLGA8RI6L899 631 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 GYG2O15488 501 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 LGALS2P05162 132 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 IQCF3P0C7M6 154 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 RBL1P28749 1068 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 PSMC4P43686 418 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 HIRAP54198 1017 aaPredicted RBP15.15■□□□□ 0.02
LETMD1-209ENST00000547318 PPIL2Q13356 520 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 SEMA5AQ13591 1074 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 MAP1SQ66K74 1059 aaPredicted RBP15.15■□□□□ 0.02
LETMD1-209ENST00000547318 TRNP1Q6NT89 227 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 KYAT3Q6YP21 454 aaKnown RBP15.15■□□□□ 0.02
LETMD1-209ENST00000547318 SLC26A9Q7LBE3 791 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 FBXO16Q8IX29 292 aaPredicted RBP15.15■□□□□ 0.02
LETMD1-209ENST00000547318 LMNTD2Q8IXW0 634 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 ANKRD13AQ8IZ07 590 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 PPM1NQ8N819 430 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 PPTC7Q8NI37 304 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 PCDH19Q8TAB3 1148 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 SLC35F5Q8WV83 523 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 CFAP36Q96G28 342 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 QKIQ96PU8 341 aaKnown RBP eCLIP15.15■□□□□ 0.02
LETMD1-209ENST00000547318 FDXACB1Q9BRP7 624 aaPredicted RBP15.15■□□□□ 0.02
LETMD1-209ENST00000547318 NRDE2Q9H7Z3 1164 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 MORF4L1Q9UBU8 362 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 PCDHA11Q9Y5I1 949 aa15.15■□□□□ 0.02
LETMD1-209ENST00000547318 SF3B1O75533 1304 aaKnown RBP eCLIP15.15■□□□□ 0.022e-7■■■■■ 99.9
LETMD1-209ENST00000547318 ESRRAP11474 423 aaPredicted RBP15.14■□□□□ 0.01
LETMD1-209ENST00000547318 ACADSP16219 412 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 CYP3A5P20815 502 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 RPL34P49207 117 aaKnown RBP15.14■□□□□ 0.01
LETMD1-209ENST00000547318 ARHGAP1Q07960 439 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 C15orf59Q2T9L4 293 aaPredicted RBP15.14■□□□□ 0.01
LETMD1-209ENST00000547318 CTAGE3PQ8IX95 158 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 PTPRN2Q92932 1015 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 MCUR1Q96AQ8 359 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 E2F7Q96AV8 911 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 NGRNQ9NPE2 291 aaKnown RBP15.14■□□□□ 0.01
LETMD1-209ENST00000547318 AKT3Q9Y243 479 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 RBM47A0AV96 593 aaKnown RBP15.14■□□□□ 0.01
LETMD1-209ENST00000547318 GSC2O15499 205 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 TSPAN1O60635 241 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 MAGEC1O60732 1142 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 ITGBL1O95965 494 aaPredicted RBP15.14■□□□□ 0.01
LETMD1-209ENST00000547318 APRTP07741 180 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 GJB1P08034 283 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 ATP6V1C1P21283 382 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 BGNP21810 368 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 BLMHQ13867 455 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 STEAP4Q687X5 459 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 STRADAQ7RTN6 431 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 DCPSQ96C86 337 aaKnown RBP15.14■□□□□ 0.01
LETMD1-209ENST00000547318 KIF12Q96FN5 646 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 C11orf84Q9BUA3 381 aaPredicted RBP15.14■□□□□ 0.01
LETMD1-209ENST00000547318 RNPEPQ9H4A4 650 aa15.14■□□□□ 0.01
LETMD1-209ENST00000547318 DENND2DQ9H6A0 471 aaPredicted RBP15.14■□□□□ 0.01
LETMD1-209ENST00000547318 F8W8V4 182 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 RFPL1O75677 317 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 STK10O94804 968 aaKnown RBP15.13■□□□□ 0.01
LETMD1-209ENST00000547318 PGK2P07205 417 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 CYP2F1P24903 491 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 SERPINB3P29508 390 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 OVGP1Q12889 678 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 ORC1Q13415 861 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 CDO1Q16878 200 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 SCYL2Q6P3W7 929 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 MARK2Q7KZI7 788 aaKnown RBP15.13■□□□□ 0.01
LETMD1-209ENST00000547318 CDR2LQ86X02 465 aaPredicted RBP15.13■□□□□ 0.01
LETMD1-209ENST00000547318 TMPRSS6Q8IU80 811 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 CRLF3Q8IUI8 442 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 SULF1Q8IWU6 871 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 BEST2Q8NFU1 509 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 CDKL2Q92772 493 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 SIGLEC10Q96LC7 697 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 KLF6Q99612 283 aaPredicted RBP15.13■□□□□ 0.01
LETMD1-209ENST00000547318 CADM1Q9BY67 442 aaKnown RBP15.13■□□□□ 0.01
LETMD1-209ENST00000547318 ADARB2Q9NS39 739 aaKnown RBP15.13■□□□□ 0.01
LETMD1-209ENST00000547318 RBPJLQ9UBG7 517 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 HEY1Q9Y5J3 304 aa15.13■□□□□ 0.01
LETMD1-209ENST00000547318 ALDH1A2O94788 518 aa15.12■□□□□ 0.01
LETMD1-209ENST00000547318 MYL2P10916 166 aa15.12■□□□□ 0.01
LETMD1-209ENST00000547318 RAP1GDS1P52306 607 aa15.12■□□□□ 0.01
LETMD1-209ENST00000547318 BCAT1P54687 386 aa15.12■□□□□ 0.01
LETMD1-209ENST00000547318 MRPS35P82673 323 aaKnown RBP15.12■□□□□ 0.01
LETMD1-209ENST00000547318 OCRLQ01968 901 aa15.12■□□□□ 0.01
LETMD1-209ENST00000547318 BST2Q10589 180 aaKnown RBP15.12■□□□□ 0.01
LETMD1-209ENST00000547318 WASHC5Q12768 1159 aa15.12■□□□□ 0.01
LETMD1-209ENST00000547318 DNAL1Q4LDG9 190 aa15.12■□□□□ 0.01
LETMD1-209ENST00000547318 SH3PXD2AQ5TCZ1 1133 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms