RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ADAM2Q99965 735 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 UGT1A7Q9HAW7 530 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 UGT1A10Q9HAW8 530 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 UGT1A8Q9HAW9 530 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 ETNK1Q9HBU6 452 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 XPNPEP3Q9NQH7 507 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.22□□□□□ -0.298e-7■■■□□ 18.7
SCAF11-209ENST00000547018 XPOTO43592 962 aaKnown RBP13.21□□□□□ -0.29
SCAF11-209ENST00000547018 GNAT1P11488 350 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 CRYBB1P53674 252 aaPredicted RBP13.21□□□□□ -0.29
SCAF11-209ENST00000547018 COPS2P61201 443 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 KBTBD12Q3ZCT8 623 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 ARHGEF18Q6ZSZ5 1173 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 GPRIN1Q7Z2K8 1008 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 PQLC3Q8N755 202 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 SLCO2A1Q92959 643 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 NKD2Q969F2 451 aaPredicted RBP13.21□□□□□ -0.29
SCAF11-209ENST00000547018 TTC17Q96AE7 1141 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 CELF6Q96J87 481 aaKnown RBP13.21□□□□□ -0.29
SCAF11-209ENST00000547018 PAFAH2Q99487 392 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 ABCF3Q9NUQ8 709 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 CCDC195A0A1B0GUA6 201 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 TRPA1O75762 1119 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 IL4RP24394 825 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 STAT4Q14765 748 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 KCNA10Q16322 511 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 SV2CQ496J9 727 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 BOLA3Q53S33 107 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 KIAA0319Q5VV43 1072 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 PRPF39Q86UA1 669 aaKnown RBP13.21□□□□□ -0.29
SCAF11-209ENST00000547018 IFNLR1Q8IU57 520 aaPredicted RBP13.21□□□□□ -0.29
SCAF11-209ENST00000547018 KIF2BQ8N4N8 673 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 NIPA2Q8N8Q9 360 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 ANKS4BQ8N8V4 417 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 TNIP3Q96KP6 325 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 TMEM209Q96SK2 561 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 DDIT4Q9NX09 232 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.29
SCAF11-209ENST00000547018 PADI3Q9ULW8 664 aa13.21□□□□□ -0.29
SCAF11-209ENST00000547018 PLXNB2O15031 1838 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 MANSC4A6NHS7 340 aaPredicted RBP13.21□□□□□ -0.3
SCAF11-209ENST00000547018 YJEFN3A6XGL0 299 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 E7ENQ6 273 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 INHBAP08476 426 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 SAT1P21673 171 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 GMPRP36959 345 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 MRPS6P82932 125 aaKnown RBP13.21□□□□□ -0.3
SCAF11-209ENST00000547018 KYAT1Q16773 422 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 HEATR6Q6AI08 1181 aaKnown RBP13.21□□□□□ -0.3
SCAF11-209ENST00000547018 HACE1Q8IYU2 909 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 B3GALT6Q96L58 329 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 KCTD15Q96SI1 283 aaPredicted RBP13.21□□□□□ -0.3
SCAF11-209ENST00000547018 APBA2Q99767 749 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 NRDE2Q9H7Z3 1164 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 PLEKHA5Q9HAU0 1116 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 CLUHO75153 1309 aa13.21□□□□□ -0.3
SCAF11-209ENST00000547018 ARL5CA6NH57 179 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 METTL18O95568 372 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 CHRNA1P02708 482 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 ITGB1P05556 798 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 CHRM1P11229 460 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-209ENST00000547018 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
SCAF11-209ENST00000547018 ATP5DP30049 168 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 DEUP1Q05D60 604 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 MROH9Q5TGP6 573 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 C17orf99Q6UX52 265 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 ZNF354CQ86Y25 554 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 MPP5Q8N3R9 675 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 PCED1BQ96HM7 432 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 PITPNM3Q9BZ71 974 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 TMEM30AQ9NV96 361 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 A6NNZ2 444 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 PIRO00625 290 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 TOP3BO95985 862 aaKnown RBP13.2□□□□□ -0.3
SCAF11-209ENST00000547018 PBX3P40426 434 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 YWHAZP63104 245 aaKnown RBP13.2□□□□□ -0.3
SCAF11-209ENST00000547018 FKBP1BP68106 108 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 CAP1Q01518 475 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 ZBTB6Q15916 424 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 TUBB8Q3ZCM7 444 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 TTC31Q49AM3 519 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-209ENST00000547018 MFSD14CQ5VZR4 134 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 CYP4V2Q6ZWL3 525 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-209ENST00000547018 PDCD7Q8N8D1 485 aaKnown RBP13.2□□□□□ -0.3
SCAF11-209ENST00000547018 CCDC63Q8NA47 563 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 SCAMP5Q8TAC9 235 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 SYT15Q9BQS2 421 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 ROPN1BQ9BZX4 212 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-209ENST00000547018 ROPN1Q9HAT0 212 aaPredicted RBP13.2□□□□□ -0.3
SCAF11-209ENST00000547018 ZC3H7BQ9UGR2 993 aaKnown RBP13.2□□□□□ -0.3
SCAF11-209ENST00000547018 DRG1Q9Y295 367 aaKnown RBP13.2□□□□□ -0.3
SCAF11-209ENST00000547018 STK38LQ9Y2H1 464 aa13.2□□□□□ -0.3
SCAF11-209ENST00000547018 FAM72CH0Y354 149 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 GOLGA8TH3BQL2 631 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 DNM1LO00429 736 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 CPP00450 1065 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 FAM200BP0CF97 657 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 ADRA1DP25100 572 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 SLC1A5Q15758 541 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 FAM72AQ5TYM5 149 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms