RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 HTR3DQ70Z44 454 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 MIB1Q86YT6 1006 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 SIX5Q8N196 739 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 CPLX3Q8WVH0 158 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 ATP2A3Q93084 1043 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 OTUB2Q96DC9 234 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 PCDHB18PQ96TA0 734 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 SYT11Q9BT88 431 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 C8orf33Q9H7E9 229 aaPredicted RBP17.58■□□□□ 0.4
CCDC38-203ENST00000546803 POPDC2Q9HBU9 364 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 TJP2Q9UDY2 1190 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 CA14Q9ULX7 337 aa17.58■□□□□ 0.4
CCDC38-203ENST00000546803 HBS1LQ9Y450 684 aaKnown RBP17.58■□□□□ 0.4
CCDC38-203ENST00000546803 BZW2Q9Y6E2 419 aaKnown RBP17.58■□□□□ 0.4
CCDC38-203ENST00000546803 PATJQ8NI35 1801 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 SLC12A8A0AV02 714 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 KRBA1A5PL33 1030 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 CAPN9O14815 690 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 HSF2BPO75031 334 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 FYNP06241 537 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 TPM1P09493 284 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 MMP8P22894 467 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 NSFP46459 744 aaKnown RBP17.57■□□□□ 0.4
CCDC38-203ENST00000546803 CENPCQ03188 943 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 EML3Q32P44 896 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 ITPRIPL2Q3MIP1 535 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 C1orf228Q6PIY5 440 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 FAM183BPQ6ZVS7 135 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 SLC26A9Q7LBE3 791 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 CPA6Q8N4T0 437 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 DCLK3Q9C098 648 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 EBF3Q9H4W6 596 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 HAUS4Q9H6D7 363 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 HPS4Q9NQG7 708 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 HEBP1Q9NRV9 189 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 SEPT11Q9NVA2 429 aaKnown RBP17.57■□□□□ 0.4
CCDC38-203ENST00000546803 ZNF510Q9Y2H8 683 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 WNT6Q9Y6F9 365 aa17.57■□□□□ 0.4
CCDC38-203ENST00000546803 MAN2B1O00754 1011 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 STC2O76061 302 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 NFATC1O95644 943 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 IRF1P10914 325 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 ARSAP15289 507 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 CASP14P31944 242 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 STARD6P59095 220 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 AMPD2Q01433 879 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 TNK2Q07912 1038 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 NR1H3Q13133 447 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 NNTQ13423 1086 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 TMEM31Q5JXX7 168 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 E4F1Q66K89 784 aaPredicted RBP17.56■□□□□ 0.4
CCDC38-203ENST00000546803 TRIM68Q6AZZ1 485 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 XYLT1Q86Y38 959 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 PHF13Q86YI8 300 aaPredicted RBP17.56■□□□□ 0.4
CCDC38-203ENST00000546803 PLD4Q96BZ4 506 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 SLC2A13Q96QE2 648 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 LINC00597Q9H2U6 94 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 MFSD1Q9H3U5 465 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 GTSE1Q9NYZ3 720 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 WDR35Q9P2L0 1181 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 SFMBT1Q9UHJ3 866 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 NAALADL1Q9UQQ1 740 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 PIAS3Q9Y6X2 628 aa17.56■□□□□ 0.4
CCDC38-203ENST00000546803 PRR33A8MZF0 331 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 AP5Z1O43299 807 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 GREM1O60565 184 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 SERPING1P05155 500 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 TAF5Q15542 800 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 TRIP4Q15650 581 aaPredicted RBP17.55■□□□□ 0.4
CCDC38-203ENST00000546803 IER5LQ5T953 404 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 ZNF852Q6ZMS4 543 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 TPRG1Q6ZUI0 275 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 ZNF571Q7Z3V5 609 aaPredicted RBP17.55■□□□□ 0.4
CCDC38-203ENST00000546803 RALGPS2Q86X27 583 aaPredicted RBP17.55■□□□□ 0.4
CCDC38-203ENST00000546803 BBS7Q8IWZ6 715 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 ADGRG2Q8IZP9 1017 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 SLC30A5Q8TAD4 765 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 DQX1Q8TE96 717 aaKnown RBP17.55■□□□□ 0.4
CCDC38-203ENST00000546803 PBXIP1Q96AQ6 731 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 PIWIL1Q96J94 861 aaKnown RBP17.55■□□□□ 0.4
CCDC38-203ENST00000546803 SERPINB11Q96P15 392 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 NELL2Q99435 816 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 DDX23Q9BUQ8 820 aaKnown RBP17.55■□□□□ 0.4
CCDC38-203ENST00000546803 ECT2Q9H8V3 914 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 C11orf16Q9NQ32 467 aa17.55■□□□□ 0.4
CCDC38-203ENST00000546803 MRPS17Q9Y2R5 130 aaKnown RBP17.55■□□□□ 0.4
CCDC38-203ENST00000546803 C5orf42Q9H799 3197 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 DAB1O75553 588 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 CALB1P05937 261 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 HMBSP08397 361 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 GZMAP12544 262 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 SKILP12757 684 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 HNRNPH3P31942 346 aaKnown RBP17.54■□□□□ 0.4
CCDC38-203ENST00000546803 NOS2P35228 1153 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 HARS2P49590 506 aaKnown RBP17.54■□□□□ 0.4
CCDC38-203ENST00000546803 GSCP56915 257 aaPredicted RBP17.54■□□□□ 0.4
CCDC38-203ENST00000546803 CDK17Q00537 523 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 RING1Q06587 406 aa17.54■□□□□ 0.4
CCDC38-203ENST00000546803 C1QBPQ07021 282 aaKnown RBP17.54■□□□□ 0.4
CCDC38-203ENST00000546803 TSR1Q2NL82 804 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms