RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 DENND1BQ6P3S1 775 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 CCNJLQ8IV13 435 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 SLAIN1Q8ND83 568 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 ACTRT1Q8TDG2 376 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 GRAMD1AQ96CP6 724 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 PADI3Q9ULW8 664 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 ZNF862O60290 1169 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 CCDC22O60826 627 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 HDCP19113 662 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 NOS2P35228 1153 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 SFSWAPQ12872 951 aaKnown RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 CRHR2Q13324 411 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 ZNF284Q2VY69 593 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 LGI2Q8N0V4 545 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 MSL3Q8N5Y2 521 aaKnown RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 SHC3Q92529 594 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 LENG1Q96BZ8 264 aaPredicted RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 TKTL2Q9H0I9 626 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 PABPC3Q9H361 631 aaKnown RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 KCTD10Q9H3F6 313 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 VIPAS39Q9H9C1 493 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 VANGL2Q9ULK5 521 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 KIAA0100Q14667 2235 aaKnown RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 MARF1Q9Y4F3 1742 aaKnown RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 SCAMP3O14828 347 aaKnown RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 TRUB2O95900 331 aaKnown RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 NCKAP1LP55160 1127 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 TUSC3Q13454 348 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 TRADDQ15628 312 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 FAM83EQ2M2I3 478 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 CES5AQ6NT32 575 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 ANKS3Q6ZW76 656 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 LCA5Q86VQ0 697 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 COLGALT1Q8NBJ5 622 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 SLC26A7Q8TE54 656 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 FAM136AQ96C01 138 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 SCUBE2Q9NQ36 999 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 CDH9Q9ULB4 789 aa12.22□□□□□ -0.45
CHERP-203ENST00000546361 PHRF1Q9P1Y6 1649 aaKnown RBP12.22□□□□□ -0.45
CHERP-203ENST00000546361 USP54Q70EL1 1684 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 TTC36A6NLP5 189 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 SUPT3HB4E1H0 165 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 SUPT3HO75486 399 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 PYGMP11217 842 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 BRCC3P46736 316 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 GEMIN4P57678 1058 aaKnown RBP12.21□□□□□ -0.45
CHERP-203ENST00000546361 PRKCZQ05513 592 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 E2F5Q15329 346 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 GRAMD1BQ3KR37 738 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 USP41Q3LFD5 358 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 NOL9Q5SY16 702 aaKnown RBP12.21□□□□□ -0.45
CHERP-203ENST00000546361 LZTR1Q8N653 840 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 FBXO36Q8NEA4 188 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 WNT8BQ93098 351 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 ZIM3Q96PE6 472 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 ADGRE3Q9BY15 652 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 COG4Q9H9E3 785 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 GON4LQ3T8J9 2241 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 O00370 1275 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 MYL2P10916 166 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 RFC1P35251 1148 aaPredicted RBP12.21□□□□□ -0.45
CHERP-203ENST00000546361 VCPP55072 806 aaKnown RBP12.21□□□□□ -0.45
CHERP-203ENST00000546361 STARD3Q14849 445 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 ANKRD20A4Q4UJ75 823 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 ANKRD20A8PQ5CZ79 823 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 ANKRD20A2Q5SQ80 823 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 ANKRD20A1Q5TYW2 823 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 DCLRE1AQ6PJP8 1040 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 CCDC149Q6ZUS6 474 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 NLRP14Q86W24 1093 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 LRRC52Q8N7C0 313 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 UROC1Q96N76 676 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 ABCC13Q9NSE7 274 aa12.21□□□□□ -0.45
CHERP-203ENST00000546361 RGS17Q9UGC6 210 aaPredicted RBP12.21□□□□□ -0.45
CHERP-203ENST00000546361 TRMT6Q9UJA5 497 aaKnown RBP12.21□□□□□ -0.45
CHERP-203ENST00000546361 TMEM120BA0PK00 339 aa12.21□□□□□ -0.46
CHERP-203ENST00000546361 SYNDIG1LA6NDD5 238 aa12.21□□□□□ -0.46
CHERP-203ENST00000546361 E2F6O75461 281 aa12.21□□□□□ -0.46
CHERP-203ENST00000546361 TOMM70O94826 608 aa12.21□□□□□ -0.46
CHERP-203ENST00000546361 SMPD1P17405 629 aa12.21□□□□□ -0.46
CHERP-203ENST00000546361 ICAM3P32942 547 aa12.21□□□□□ -0.46
CHERP-203ENST00000546361 PRKCIP41743 596 aa12.21□□□□□ -0.46
CHERP-203ENST00000546361 LRIG3Q6UXM1 1119 aa12.21□□□□□ -0.46
CHERP-203ENST00000546361 SLC24A5Q71RS6 500 aa12.21□□□□□ -0.46
CHERP-203ENST00000546361 FICDQ9BVA6 458 aa12.21□□□□□ -0.46
CHERP-203ENST00000546361 DHX33Q9H6R0 707 aaKnown RBP12.21□□□□□ -0.46
CHERP-203ENST00000546361 ETNK1Q9HBU6 452 aa12.21□□□□□ -0.46
CHERP-203ENST00000546361 PRRC2BQ5JSZ5 2229 aaKnown RBP12.2□□□□□ -0.46
CHERP-203ENST00000546361 IGLV3-22A0A075B6J6 115 aa12.2□□□□□ -0.46
CHERP-203ENST00000546361 TRIM66O15016 1216 aa12.2□□□□□ -0.46
CHERP-203ENST00000546361 TLL1O43897 1013 aa12.2□□□□□ -0.46
CHERP-203ENST00000546361 ATP5HO75947 161 aa12.2□□□□□ -0.46
CHERP-203ENST00000546361 ITGALP20701 1170 aa12.2□□□□□ -0.46
CHERP-203ENST00000546361 ACAP1Q15027 740 aa12.2□□□□□ -0.46
CHERP-203ENST00000546361 TERF2Q15554 542 aa12.2□□□□□ -0.46
CHERP-203ENST00000546361 C15orf59Q2T9L4 293 aaPredicted RBP12.2□□□□□ -0.46
CHERP-203ENST00000546361 ANKRD52Q8NB46 1076 aa12.2□□□□□ -0.46
CHERP-203ENST00000546361 ZFP42Q96MM3 310 aa12.2□□□□□ -0.46
CHERP-203ENST00000546361 SLC27A5Q9Y2P5 690 aa12.2□□□□□ -0.46
CHERP-203ENST00000546361 ATRNL1Q5VV63 1379 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms