RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 SLC6A3Q01959 620 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 MTA1Q13330 715 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 TPRG1Q6ZUI0 275 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 BEND5Q7L4P6 421 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 RALGPS2Q86X27 583 aaPredicted RBP18.28■□□□□ 0.52
CD9-211ENST00000546073 CCDC26Q8TAB7 109 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 CPA5Q8WXQ8 436 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 NDRG1Q92597 394 aaKnown RBP18.28■□□□□ 0.52
CD9-211ENST00000546073 SYN2Q92777 582 aaPredicted RBP18.28■□□□□ 0.52
CD9-211ENST00000546073 RNF34Q969K3 372 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 ZFYVE19Q96K21 471 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 CPXM1Q96SM3 734 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 DDX50Q9BQ39 737 aaKnown RBP18.28■□□□□ 0.52
CD9-211ENST00000546073 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.28■□□□□ 0.52
CD9-211ENST00000546073 KLF16Q9BXK1 252 aaPredicted RBP18.28■□□□□ 0.52
CD9-211ENST00000546073 EBF3Q9H4W6 596 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 HEBP1Q9NRV9 189 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 RRN3Q9NYV6 651 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 AIPL1Q9NZN9 384 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 NOCTQ9UK39 431 aaKnown RBP18.28■□□□□ 0.52
CD9-211ENST00000546073 PAXBP1Q9Y5B6 917 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 WNT6Q9Y6F9 365 aa18.28■□□□□ 0.52
CD9-211ENST00000546073 SLC2A3P11169 496 aa18.27■□□□□ 0.52
CD9-211ENST00000546073 UBXN2BQ14CS0 331 aa18.27■□□□□ 0.52
CD9-211ENST00000546073 DCAF6Q58WW2 860 aa18.27■□□□□ 0.52
CD9-211ENST00000546073 FAM102AQ5T9C2 384 aaPredicted RBP18.27■□□□□ 0.52
CD9-211ENST00000546073 NUGGCQ68CJ6 796 aa18.27■□□□□ 0.52
CD9-211ENST00000546073 POTEHQ6S545 545 aa18.27■□□□□ 0.52
CD9-211ENST00000546073 BMP8AQ7Z5Y6 402 aa18.27■□□□□ 0.52
CD9-211ENST00000546073 DDX1Q92499 740 aaKnown RBP18.27■□□□□ 0.52
CD9-211ENST00000546073 FAM3CQ92520 227 aa18.27■□□□□ 0.52
CD9-211ENST00000546073 KHSRPQ92945 711 aaKnown RBP eCLIP18.27■□□□□ 0.52
CD9-211ENST00000546073 RSPRY1Q96DX4 576 aa18.27■□□□□ 0.52
CD9-211ENST00000546073 SMOC2Q9H3U7 446 aa18.27■□□□□ 0.52
CD9-211ENST00000546073 OSER1Q9NX31 292 aa18.27■□□□□ 0.52
CD9-211ENST00000546073 MYH10P35580 1976 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 KANSL1LA0AUZ9 987 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 TYW5A2RUC4 315 aaKnown RBP18.26■□□□□ 0.51
CD9-211ENST00000546073 GOLGA6L6A8MZA4 724 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 PAPSS1O43252 624 aaPredicted RBP18.26■□□□□ 0.51
CD9-211ENST00000546073 APOEP02649 317 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 SCNN1AP37088 669 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 SLC11A2P49281 568 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 RNASE9P60153 205 aaKnown RBP18.26■□□□□ 0.51
CD9-211ENST00000546073 GAD2Q05329 585 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 SARM1Q6SZW1 724 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 HTR3DQ70Z44 454 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 CCDC117Q8IWD4 279 aaPredicted RBP18.26■□□□□ 0.51
CD9-211ENST00000546073 DRC7Q8IY82 874 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 FBXL6Q8N531 539 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 WDTC1Q8N5D0 677 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 TTC8Q8TAM2 541 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 SLC20A1Q8WUM9 679 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 BAP1Q92560 729 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 FAM83CQ9BQN1 747 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 DEF6Q9H4E7 631 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 HAUS4Q9H6D7 363 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 ECT2Q9H8V3 914 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 FAM204AQ9H8W3 233 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 TBC1D17Q9HA65 648 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 GTSE1Q9NYZ3 720 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 ADAM22Q9P0K1 906 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 SIT1Q9Y3P8 196 aa18.26■□□□□ 0.51
CD9-211ENST00000546073 PTPRDP23468 1912 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 GOLGA8SH3BPF8 625 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 MDM4O15151 490 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 SERPING1P05155 500 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 CLCN5P51795 746 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 TBX4P57082 545 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 STARD6P59095 220 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 NOMO3P69849 1222 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 FMO1Q01740 532 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 GRSF1Q12849 480 aaKnown RBP eCLIP18.25■□□□□ 0.51
CD9-211ENST00000546073 LRRC32Q14392 662 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 CLEC16AQ2KHT3 1053 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 ANO4Q32M45 955 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 FAM183BPQ6ZVS7 135 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 CNGA4Q8IV77 575 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 OR8K1Q8NGG5 319 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 CLEC4CQ8WTT0 213 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 TRIM11Q96F44 468 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 LRRC3BQ96PB8 259 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 XPO6Q96QU8 1125 aaKnown RBP18.25■□□□□ 0.51
CD9-211ENST00000546073 SELENOOQ9BVL4 669 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.25■□□□□ 0.51
CD9-211ENST00000546073 SFMBT1Q9UHJ3 866 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 CYTH4Q9UIA0 394 aa18.25■□□□□ 0.51
CD9-211ENST00000546073 NOTCH4Q99466 2003 aa18.24■□□□□ 0.51
CD9-211ENST00000546073 FAM86C2PA6NEL3 165 aa18.24■□□□□ 0.51
CD9-211ENST00000546073 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.24■□□□□ 0.51
CD9-211ENST00000546073 SPECC1L-ADORA2AF8WAN1 911 aa18.24■□□□□ 0.51
CD9-211ENST00000546073 F9P00740 461 aa18.24■□□□□ 0.51
CD9-211ENST00000546073 ERBB2P04626 1255 aa18.24■□□□□ 0.51
CD9-211ENST00000546073 CYP1A1P04798 512 aaPredicted RBP18.24■□□□□ 0.51
CD9-211ENST00000546073 ABCB4P21439 1286 aa18.24■□□□□ 0.51
CD9-211ENST00000546073 CORO1AP31146 461 aaKnown RBP18.24■□□□□ 0.51
CD9-211ENST00000546073 CASP14P31944 242 aa18.24■□□□□ 0.51
CD9-211ENST00000546073 NOS2P35228 1153 aa18.24■□□□□ 0.51
CD9-211ENST00000546073 PBX1P40424 430 aa18.24■□□□□ 0.51
CD9-211ENST00000546073 PRKCIP41743 596 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms