RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ITGA11Q9UKX5 1188 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 ADAMTS5Q9UNA0 930 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 WDR90Q96KV7 1748 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 A0A088AWK7 358 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 PRR5-ARHGAP8B1AHC4 643 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 KCNN4O15554 427 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 GAS2O43903 313 aaKnown RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 AVILO75366 819 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 MAFO75444 373 aaPredicted RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 ZBED1O96006 694 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 UBTFL6P0CB48 400 aaPredicted RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 L1CAMP32004 1257 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 POLE2P56282 527 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 IRX4P78413 519 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 ARHGAP8P85298 464 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 TFAMQ00059 246 aaKnown RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 BTKQ06187 659 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 DGKZQ13574 1117 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 TNFAIP1Q13829 316 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 TAF5Q15542 800 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 ZNF667Q5HYK9 610 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 NPNTQ6UXI9 565 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 UNC5AQ6ZN44 842 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 NCAPG2Q86XI2 1143 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 PDSS2Q86YH6 399 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 RTKN2Q8IZC4 609 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 STKLD1Q8NE28 680 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 OR6Y1Q8NGX8 325 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 PIP4K2CQ8TBX8 421 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 ZNF526Q8TF50 670 aaPredicted RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 WNK4Q96J92 1243 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 RILPQ96NA2 401 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 TCHPQ9BT92 498 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 GCOM2Q9BZD3 368 aaPredicted RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 VPS33BQ9H267 617 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 FAM124BQ9H5Z6 455 aaPredicted RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 ACAD9Q9H845 621 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 NRBP2Q9NSY0 501 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 ZNF214Q9UL59 606 aaPredicted RBP9.07□□□□□ -0.96
TDP1-204ENST00000545686 PPM1HQ9ULR3 514 aa9.07□□□□□ -0.96
TDP1-204ENST00000545686 CCDC195A0A1B0GUA6 201 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 C2CD4BA6NLJ0 364 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 WNT10BO00744 389 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 APOL1O14791 398 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 PRPSAP2O60256 369 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 AP1G2O75843 785 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 IL18RAPO95256 599 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 HMGCRP04035 888 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 CSH1P0DML2 217 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 CSH2P0DML3 217 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 PROZP22891 400 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 RPS6KA3P51812 740 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 NRLP54845 237 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 ALDH18A1P54886 795 aaKnown RBP9.06□□□□□ -0.96
TDP1-204ENST00000545686 PTPN11Q06124 597 aaPredicted RBP9.06□□□□□ -0.96
TDP1-204ENST00000545686 MMRN1Q13201 1228 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 TUBB3Q13509 450 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 LIN52Q52LA3 116 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 RABGAP1LQ5R372 815 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 FAM102AQ5T9C2 384 aaPredicted RBP9.06□□□□□ -0.96
TDP1-204ENST00000545686 SLC9A4Q6AI14 798 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 ZBTB33Q86T24 672 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 CCNJLQ8IV13 435 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 CDKL3Q8IVW4 592 aaPredicted RBP9.06□□□□□ -0.96
TDP1-204ENST00000545686 ZBTB8OSQ8IWT0 167 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 NDUFAF2Q8N183 169 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 PLD5Q8N7P1 536 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 PIWIL2Q8TC59 973 aaKnown RBP9.06□□□□□ -0.96
TDP1-204ENST00000545686 CLPTM1LQ96KA5 538 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 TEPSINQ96N21 525 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 TUBGCP5Q96RT8 1024 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 TBCBQ99426 244 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 EBNA1BP2Q99848 306 aaKnown RBP9.06□□□□□ -0.96
TDP1-204ENST00000545686 GORASP1Q9BQQ3 440 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 SPATA16Q9BXB7 569 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 SLC13A1Q9BZW2 595 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 C2orf40Q9H1Z8 148 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 SMYD2Q9NRG4 433 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 PCMTD2Q9NV79 361 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 PCDHA11Q9Y5I1 949 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 PDLIM1O00151 329 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 DPYSL4O14531 572 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 GLRA3O75311 464 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 MICAL2O94851 1124 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 ITGBL1O95965 494 aaPredicted RBP9.06□□□□□ -0.96
TDP1-204ENST00000545686 PRKCBP05771 671 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 ALOX15P16050 662 aaPredicted RBP9.06□□□□□ -0.96
TDP1-204ENST00000545686 GSTT1P30711 240 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 COPAP53621 1224 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 SP2Q02086 613 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 ASPHQ12797 758 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 NAB1Q13506 487 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 GRM2Q14416 872 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 KRT81Q14533 505 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 MXD4Q14582 209 aaPredicted RBP9.06□□□□□ -0.96
TDP1-204ENST00000545686 STXBP2Q15833 593 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 SLC5A9Q2M3M2 681 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 MDH1BQ5I0G3 518 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 MAP3K21Q5TCX8 1036 aa9.06□□□□□ -0.96
TDP1-204ENST00000545686 IER5Q5VY09 327 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms