RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 FGGP02679 453 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 LRG1P02750 347 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 FYNP06241 537 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 PYGMP11217 842 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 TFE3P19532 575 aaPredicted RBP14.36□□□□□ -0.11
SCARB1-209ENST00000545305 IL1R2P27930 398 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 BMP8BP34820 402 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 PBX2P40425 430 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 COPS2P61201 443 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 NME3Q13232 169 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 KRT81Q14533 505 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 SMTNL2Q2TAL5 461 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 SCD5Q86SK9 330 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 TADA2BQ86TJ2 420 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 TAC4Q86UU9 113 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 ELMOD1Q8N336 334 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 KREMEN2Q8NCW0 462 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 DQX1Q8TE96 717 aaKnown RBP14.36□□□□□ -0.11
SCARB1-209ENST00000545305 MAIP1Q8WWC4 291 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 HSPH1Q92598 858 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 PGAP3Q96FM1 320 aaPredicted RBP14.36□□□□□ -0.11
SCARB1-209ENST00000545305 SLC28A3Q9HAS3 691 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 NMUR1Q9HB89 426 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 CLIC5Q9NZA1 410 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 SMARCAL1Q9NZC9 954 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 UXTQ9UBK9 157 aaPredicted RBP14.36□□□□□ -0.11
SCARB1-209ENST00000545305 ASB3Q9Y575 518 aa14.36□□□□□ -0.11
SCARB1-209ENST00000545305 COL4A4P53420 1690 aaPredicted RBP14.36□□□□□ -0.11
SCARB1-209ENST00000545305 PI4K2BG5E9Z4 385 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 MDM4O15151 490 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 ENDOD1O94919 500 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 SPATA31D3P0C874 917 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 RARAP10276 462 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 AIF1P55008 147 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 ARL13BQ3SXY8 428 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 RAB6CQ53S08 254 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 OTUD1Q5VV17 481 aaPredicted RBP14.35□□□□□ -0.11
SCARB1-209ENST00000545305 TXNRD3NBQ6F5E7 133 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 MSANTD2Q6P1R3 559 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 ELMSAN1Q6PJG2 1045 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 SPOCD1Q6ZMY3 1216 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 SPATA31D4Q6ZUB0 917 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 ZNF572Q7Z3I7 529 aaPredicted RBP14.35□□□□□ -0.11
SCARB1-209ENST00000545305 MAP7D3Q8IWC1 876 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 TDHQ8IZJ6 230 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 KCTD6Q8NC69 237 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 RNF34Q969K3 372 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 RNF25Q96BH1 459 aaPredicted RBP14.35□□□□□ -0.11
SCARB1-209ENST00000545305 ACSF2Q96CM8 615 aaPredicted RBP14.35□□□□□ -0.11
SCARB1-209ENST00000545305 TRMT2BQ96GJ1 504 aaKnown RBP14.35□□□□□ -0.11
SCARB1-209ENST00000545305 ZNF512Q96ME7 567 aaPredicted RBP14.35□□□□□ -0.11
SCARB1-209ENST00000545305 PEBP4Q96S96 227 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 CDK5RAP1Q96SZ6 601 aaKnown RBP14.35□□□□□ -0.11
SCARB1-209ENST00000545305 SNRNP25Q9BV90 132 aaKnown RBP14.35□□□□□ -0.11
SCARB1-209ENST00000545305 RAB6CQ9H0N0 254 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 LMAN2LQ9H0V9 348 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 SMOC2Q9H3U7 446 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.35□□□□□ -0.11
SCARB1-209ENST00000545305 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.35□□□□□ -0.113e-10■■□□□ 13.7
SCARB1-209ENST00000545305 GREB1Q4ZG55 1949 aa14.35□□□□□ -0.11
SCARB1-209ENST00000545305 PDE2AO00408 941 aaPredicted RBP14.34□□□□□ -0.11
SCARB1-209ENST00000545305 KRIT1O00522 736 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 C1RP00736 705 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 C8AP07357 584 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 RARGP13631 454 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 IRS1P35568 1242 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 PPP3CCP48454 512 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 TUBB4BP68371 445 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 PITX1P78337 314 aaPredicted RBP14.34□□□□□ -0.11
SCARB1-209ENST00000545305 ITIH3Q06033 890 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 PDK2Q15119 407 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 PPP2R5EQ16537 467 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 ATP13A4Q4VNC1 1196 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 EFHC2Q5JST6 749 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 PPM1LQ5SGD2 360 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 ERMARDQ5T6L9 678 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 AADACL2Q6P093 401 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 LILRA6Q6PI73 481 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 RTL10Q7L3V2 364 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 BNIPLQ7Z465 357 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 FAM131BQ86XD5 332 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 SLC13A5Q86YT5 568 aaPredicted RBP14.34□□□□□ -0.11
SCARB1-209ENST00000545305 PSTKQ8IV42 348 aaKnown RBP14.34□□□□□ -0.11
SCARB1-209ENST00000545305 MYRIPQ8NFW9 859 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 ADAM32Q8TC27 787 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 ARNTL2Q8WYA1 636 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 PSMG2Q969U7 264 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 MYRFLQ96LU7 910 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 SERPINB11Q96P15 392 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 ADAM33Q9BZ11 813 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 OSBPL8Q9BZF1 889 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 CERS4Q9HA82 394 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 PIGVQ9NUD9 493 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 TRPM5Q9NZQ8 1165 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 DPP7Q9UHL4 492 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 AP4E1Q9UPM8 1137 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 ZNF638Q14966 1978 aaKnown RBP14.34□□□□□ -0.11
SCARB1-209ENST00000545305 CEP290O15078 2479 aa14.34□□□□□ -0.11
SCARB1-209ENST00000545305 EFCAB8A8MWE9 144 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms